Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F13
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    26   0.29 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   4.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.3  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      22   6.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.3  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 562 LFTVIRKTLIIDDMPMEYVHFIRGH 488
           LFT + +  I + MPME +  +R H
Sbjct: 322 LFTTVHRICIGETMPMELIENLRNH 346


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +2

Query: 440 SRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHP 598
           S H + LS   ++ D       + LH H V  Q  PY   + P+  +    HP
Sbjct: 52  STHLMDLSSPPEHRDLPIYQSHHHLHHHQVLYQQSPYLMYENPDEEKRYQEHP 104


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 358 VCKIEELRPSFQASYNAPYRCACHSSGRC 272
           V K+E +   + A    P  C CH+  RC
Sbjct: 459 VYKVETVGDKYMAVSGLPEPCRCHA--RC 485


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 350 LTNDFRELRINSTDIYDYPRY 412
           ++ND + L   S D+   PRY
Sbjct: 33  VSNDMQPLEARSADLVPEPRY 53


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 358 VCKIEELRPSFQASYNAPYRCACHSSGRC 272
           V K+E +   + A    P  C CH+  RC
Sbjct: 459 VYKVETVGDKYMAVSGLPEPCRCHA--RC 485


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 421 GTPAGHIQALFIVIEDTKEYRC 486
           G    H+    +++ED  EY C
Sbjct: 478 GDVISHVNISHVMVEDGGEYSC 499


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 421 GTPAGHIQALFIVIEDTKEYRC 486
           G    H+    +++ED  EY C
Sbjct: 478 GDVISHVNISHVMVEDGGEYSC 499


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,250
Number of Sequences: 438
Number of extensions: 3525
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)