Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F12
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.           22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  

>U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.
          Length = 45

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 62 GVNRAFDEVIESSPTLDME 6
          G+N AFD + +  P+LD +
Sbjct: 12 GLNEAFDRLRQVIPSLDAD 30


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 553  SRQNRSSRSGDYPLQTDKYL*NWFWYR 473
            SR   +  S DY +    Y  NW WYR
Sbjct: 2310 SRPIGTDTSDDYKVVC--YFTNWAWYR 2334


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 324  NEKSFHAQDLFFDISHKISGTDKKNHPNL 410
            NE+    Q+   D++ KI   +K  +P+L
Sbjct: 1099 NEQLRKIQESLRDLNRKIESLEKMQYPDL 1127


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 324  NEKSFHAQDLFFDISHKISGTDKKNHPNL 410
            NE+    Q+   D++ KI   +K  +P+L
Sbjct: 1099 NEQLRKIQESLRDLNRKIESLEKMQYPDL 1127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,298
Number of Sequences: 336
Number of extensions: 3110
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)