Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F10
         (440 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2K9E3 Cluster: Maleylacetoacetate isomerase protein; n...    33   2.7  
UniRef50_A7HBT2 Cluster: Putative uncharacterized protein; n=4; ...    33   3.6  
UniRef50_Q4Z6H8 Cluster: Putative uncharacterized protein; n=6; ...    33   3.6  
UniRef50_Q4XL16 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_UPI000049860B Cluster: Leucine-rich repeat containing p...    32   6.3  
UniRef50_UPI0000F2DB73 Cluster: PREDICTED: similar to class II, ...    31   8.3  

>UniRef50_Q2K9E3 Cluster: Maleylacetoacetate isomerase protein; n=3;
           Alphaproteobacteria|Rep: Maleylacetoacetate isomerase
           protein - Rhizobium etli (strain CFN 42 / ATCC 51251)
          Length = 210

 Score = 33.1 bits (72), Expect = 2.7
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -3

Query: 381 TEQTDRQKM*TLSFFASLSYIPGVCNLRLVSHMR 280
           T+  DRQK+  L++  ++   P VCNL +VSH+R
Sbjct: 87  TDSADRQKVRALAYAIAMDIHP-VCNLHVVSHLR 119


>UniRef50_A7HBT2 Cluster: Putative uncharacterized protein; n=4;
           Cystobacterineae|Rep: Putative uncharacterized protein -
           Anaeromyxobacter sp. Fw109-5
          Length = 136

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 425 TKCPVXIGSTVPEITRNKQTDKKCKHCHFLHRYLIYQGCAT 303
           TKC + +  TV  +   +    +C  CH +HRY    G AT
Sbjct: 13  TKCQLTLAHTVHAVVSGRPVKVECNTCHGVHRYRDPPGRAT 53


>UniRef50_Q4Z6H8 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 1243

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = +3

Query: 150 IQLVFHICCQGRTDRFFFKYIINTKIKRELWYIYREPQIILQRAACGSRAAGCTPLVYKI 329
           +  ++     G    F+F+YI+N  IK   ++IY + QII  +    S      P+    
Sbjct: 330 LHFLYSYVFMGINTDFYFEYILNKNIKMLFFFIYTDHQIIFNKHNLKSNQTLSLPIFLNY 389

Query: 330 AMQ 338
            +Q
Sbjct: 390 TIQ 392


>UniRef50_Q4XL16 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 613

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 198 FFKYIINTKIKRELWYIYREPQIILQRAACGSRAAGCTPLVYKIAMQ 338
           +F+YI+N K+  + ++I+ + QII  +    S      P+  K A+Q
Sbjct: 486 YFEYILNEKMNMQFFFIHTDRQIIFNKPNLKSNQTLSLPIFLKYAIQ 532


>UniRef50_UPI000049860B Cluster: Leucine-rich repeat containing
           protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
           Leucine-rich repeat containing protein - Entamoeba
           histolytica HM-1:IMSS
          Length = 837

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 290 ATCGSLKDYLWLSINVPEFPFYFCV-NNIFKKKTIR 186
           A CGS+K Y+  + N+ E  F  C+ NN  KKK ++
Sbjct: 688 AQCGSIKSYIISNSNIKEIGFDHCLSNNEMKKKIMQ 723


>UniRef50_UPI0000F2DB73 Cluster: PREDICTED: similar to class II, major
            histocompatibility complex, transactivator,; n=1;
            Monodelphis domestica|Rep: PREDICTED: similar to class
            II, major histocompatibility complex, transactivator, -
            Monodelphis domestica
          Length = 1277

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -1

Query: 332  RYLIYQGCATCGS*ATCGSLKDYLWLSINVPEFPFYFCVNNIFKKKTIRTSLTTNMKD*L 153
            R L+  GC TC       SL D +WL  ++ +   +  + +  KK TI      +MKD  
Sbjct: 1021 RILVQLGCVTCFR----ASLSDTVWLWESLQQSGEHELLQSSTKKFTIDPFKVKSMKDVE 1076

Query: 152  DRCNKINFRPS 120
            D C+ ++ + S
Sbjct: 1077 DLCSLVHIQSS 1087


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,320,390
Number of Sequences: 1657284
Number of extensions: 8932757
Number of successful extensions: 20014
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20011
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)