Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_F10
(440 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01430.1 68414.m00058 expressed protein similar to hypothetic... 29 1.8
At3g15380.1 68416.m01950 choline transporter-related contains we... 28 2.4
At4g03470.1 68417.m00474 ankyrin repeat family protein contains ... 27 5.6
At4g22120.1 68417.m03198 early-responsive to dehydration protein... 26 9.8
At4g15500.1 68417.m02368 UDP-glucoronosyl/UDP-glucosyl transfera... 26 9.8
At4g05040.2 68417.m00741 ankyrin repeat family protein contains ... 26 9.8
At4g05040.1 68417.m00740 ankyrin repeat family protein contains ... 26 9.8
At3g21620.1 68416.m02727 early-responsive to dehydration protein... 26 9.8
At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate transloca... 26 9.8
>At1g01430.1 68414.m00058 expressed protein similar to hypothetical
protein GB:CAB80917 GI:7267605 from [Arabidopsis
thaliana]
Length = 456
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 440 SYPVNTKCPVXIGSTVPEITRNKQTDKKCKH 348
S V+TKC + IG+ VP+ + T+ C+H
Sbjct: 92 SQNVSTKCDIFIGNWVPDPSGPIYTNVSCRH 122
>At3g15380.1 68416.m01950 choline transporter-related contains weak
similarity to CD92 protein [Homo sapiens]
gi|16945323|emb|CAC82175
Length = 700
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 281 RMWLTSRRLHTPGI*DSDAKNDNVYIFCLSVCSV*SPERLN 403
R WL +++ G+ D + K N CL C S + LN
Sbjct: 89 RYWLNPNQVYESGLKDGELKLANARTICLLDCPAPSDDTLN 129
>At4g03470.1 68417.m00474 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 683
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 399 NRSGDYTEQTDRQKM*TLSFFASLSYIPGVCNL 301
N ++ D + LSF AS+ Y GVCNL
Sbjct: 291 NEYPSLVDERDEEGRTCLSFGASIGYHKGVCNL 323
>At4g22120.1 68417.m03198 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 771
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 162 FHICCQGRTDRFFFKYIINTKIKRELWYIYREPQIILQ 275
FH C+GR + F +Y + + ++ REP + L+
Sbjct: 668 FHHFCKGRYEPAFIRYPLQEAMMKDTLETAREPNLNLK 705
>At4g15500.1 68417.m02368 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 475
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 146 CNKINFRPSYE*IASSKTARTNIKGGVIQCFVKCV 42
C ++NF P +KT R++IKG + + C+
Sbjct: 233 CPQVNFNPIGPLFTMAKTIRSDIKGDISKPDSDCI 267
>At4g05040.2 68417.m00741 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 572
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 378 EQTDRQKM*TLSFFASLSYIPGVCNL 301
++ D + LSF AS+ + GVCNL
Sbjct: 301 DERDEEGRTCLSFAASIGFYKGVCNL 326
>At4g05040.1 68417.m00740 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 572
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 378 EQTDRQKM*TLSFFASLSYIPGVCNL 301
++ D + LSF AS+ + GVCNL
Sbjct: 301 DERDEEGRTCLSFAASIGFYKGVCNL 326
>At3g21620.1 68416.m02727 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 756
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 TEINFVTTIQLV-FHICCQGRTDRFFFKYIINTKIKRELWYIYREPQIILQ 275
T + F+ + + FH CQGR F Y + + ++ REP + L+
Sbjct: 652 TPLLFILPVLTIGFHKFCQGRYQPIFVTYPLQDAMVKDTLERMREPNLNLK 702
>At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate
translocator-related similar to
glucose-6-phosphate/phosphate-translocators from
[Mesembryanthemum crystallinum] GI:9295277, [Solanum
tuberosum] GI:2997593, [Pisum sativum] GI:2997591;
contains Pfam profile PF00892: Integral membrane protein
Length = 336
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 240 WYIYREPQIILQRAACGSRAAGCT 311
W I+R P + CG GCT
Sbjct: 271 WLIFRNPISYMNAVGCGITLVGCT 294
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,018,034
Number of Sequences: 28952
Number of extensions: 202155
Number of successful extensions: 395
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 702840360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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