Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F09
         (160 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   3.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    19   4.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    19   4.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = +3

Query: 63  FSSDLYYKIIIF--FVIPM 113
           F S LY+  IIF  F+IP+
Sbjct: 232 FWSALYFLTIIFLFFIIPL 250


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 55  IHYFLRIFIIK*LYFLLY 108
           I+YF   FII  ++ L Y
Sbjct: 212 IYYFYSAFIIFTIHLLFY 229



 Score = 18.6 bits (36), Expect = 5.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 55  IHYFLRIFII 84
           I+YF R FII
Sbjct: 298 IYYFCRAFII 307


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 17  QAVATTKPRPPPKS 58
           Q    +KPRP P S
Sbjct: 251 QPATKSKPRPAPAS 264


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 61  YFLRIFIIK*LYFL 102
           Y+L +F+I  LY L
Sbjct: 100 YYLLLFVINVLYVL 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,925
Number of Sequences: 336
Number of extensions: 203
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 33
effective length of database: 111,497
effective search space used:  2118443
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)