Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F09
         (160 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    19   4.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    19   5.6  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              19   7.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    19   7.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    18   9.8  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -3

Query: 107 YNKKYNY 87
           YN KYNY
Sbjct: 100 YNNKYNY 106


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 90  IIFFVIPM 113
           IIFF+IPM
Sbjct: 218 IIFFLIPM 225


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 56  SIIFFGSLL*NNYIFCYTNE 115
           SI+F  S+     IF Y+NE
Sbjct: 6   SIMFIHSIFLILIIFIYSNE 25


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 56  SIIFFGSLL*NNYIFCYTNE 115
           SI+F  S+     IF Y+NE
Sbjct: 6   SIMFIHSIFLILIIFIYSNE 25


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 90  IIFFVIPM 113
           I+FF+IPM
Sbjct: 211 ILFFLIPM 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,914
Number of Sequences: 438
Number of extensions: 363
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 32
effective length of database: 132,327
effective search space used:  2646540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)