Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_F07
(282 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 26 1.2
SPBC32H8.08c |||mannosyltransferase complex subunit |Schizosacch... 25 1.6
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 25 2.1
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 25 2.7
SPAC25B8.10 |||trans-aconitate 3-methyltransferase |Schizosaccha... 25 2.7
SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po... 24 3.6
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 24 4.7
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 23 6.3
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 23 6.3
SPBC354.02c |sec61||translocon alpha subunit Sec61|Schizosacchar... 23 6.3
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 23 8.3
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 1.2
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 131 GPYPYRSVNGTNNHGYY*NFRH-HFYLLINMIIKT*KN*VCF 9
GPY + +N GY+ + +H F L NM N +CF
Sbjct: 359 GPYTASQIQAWSNEGYFTDAKHAAFIQLANMDEWMYPNNICF 400
>SPBC32H8.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 25.4 bits (53), Expect = 1.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = -2
Query: 206 KRYHIIDFFYVAAFLMCQFLWFLRQGPYPYRSVNGTNNHGYY*NFRHHFYLLINMI 39
KRY + + + L+C+FL F G + S+ + G++ N+R ++L + +
Sbjct: 19 KRYDTLHVWKLIKLLICKFLLFHDFGTALFTSLVKASMLGFH-NWRRTYWLYLKKL 73
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 25.0 bits (52), Expect = 2.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 179 YVAAFLMCQFLWFLRQGPYPYRSVNGTNNH 90
YV + C + W L + P+ RS TN++
Sbjct: 338 YVQRLVRCDYTWHLCKSPFK-RSTGNTNDN 366
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 24.6 bits (51), Expect = 2.7
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2
Query: 152 FLWFLRQGPYP 120
FLW LRQG YP
Sbjct: 269 FLWDLRQGQYP 279
>SPAC25B8.10 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 24.6 bits (51), Expect = 2.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 69 SKILIISMIVCTVNAAVWIGALPKKPKELAHKEGCYIKEINDVVPFGTELKPIGHCYR 242
S+ L + + +N+ +I LP++ KE H E + EI +P I CY+
Sbjct: 190 SRCLTVEELHTLMNSFSFIYKLPEEEKEKVHAE---LDEIAKTIPRVQNTDQIKLCYQ 244
>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 24.2 bits (50), Expect = 3.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 145 GFLGKAPIHTAALTVQTI 92
G + +AP+HTAAL V+ +
Sbjct: 336 GLIPQAPMHTAALCVKRV 353
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 23.8 bits (49), Expect = 4.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 150 ELAHKEGCYIKEINDVVPFGTE 215
++A K+G +KEIN V F E
Sbjct: 449 KIASKDGTNLKEINSVPEFSDE 470
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 23.4 bits (48), Expect = 6.3
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 128 PYPYRSVNGTNNHGY-Y*NFRHHFY 57
PY YR ++G ++H Y + N + FY
Sbjct: 192 PYSYRFMDGFSSHTYKFVNDKGEFY 216
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 23.4 bits (48), Expect = 6.3
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 171 CYIKEINDVVPFGTELKPIGHCYRITCGGSMIDYASC 281
CYI+ N + T LK + H +TCG +++D ASC
Sbjct: 327 CYIETKN--LDGETNLK-MRHA--LTCGKNVVDEASC 358
>SPBC354.02c |sec61||translocon alpha subunit
Sec61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 479
Score = 23.4 bits (48), Expect = 6.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 12/54 (22%)
Frame = +3
Query: 78 LIISMIVCTVNAAVWI---GALPK------KPKELA---HKEGCYIKEINDVVP 203
+ +M C + + +WI GA P+ K ++L H+EG KE+ ++P
Sbjct: 365 VFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIP 418
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 23.0 bits (47), Expect = 8.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 275 SVINHASSTGNSVAMSDGLEFCSKRYHIIDFFYV 174
SVI++ SSTG S+ +S+ S +++ F YV
Sbjct: 373 SVISNHSSTGKSLVISEWAYLASGSANVV-FEYV 405
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,245,643
Number of Sequences: 5004
Number of extensions: 24202
Number of successful extensions: 59
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 63619130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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