Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_F07
         (282 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545...    30   0.32 
03_06_0677 + 35476009-35476014,35476974-35477474,35477574-354777...    26   5.2  
03_06_0636 - 35215034-35215336,35215417-35215584,35215599-352157...    26   5.2  
10_07_0042 - 12298536-12298589,12298704-12298810,12298850-122988...    25   9.0  
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    25   9.0  
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748...    25   9.0  

>02_05_0941 + 32953065-32953089,32954252-32954406,32954486-32954587,
            32955089-32955140,32955237-32955349,32955542-32955610,
            32955942-32956049,32956517-32956661,32957245-32957476,
            32957567-32957853,32957951-32958087,32958520-32958667,
            32959464-32959595,32960239-32960367,32960707-32960834,
            32960911-32961075,32961462-32961587,32962088-32962161,
            32962285-32962534,32962875-32963054,32963128-32963361,
            32964771-32964840,32965065-32965177,32965403-32965511,
            32965639-32965688,32965823-32965889,32966131-32966203,
            32966393-32966448,32966729-32966831,32967377-32967458,
            32967717-32967779,32967918-32967977,32968356-32968448,
            32968561-32968623,32968699-32968797
          Length = 1363

 Score = 29.9 bits (64), Expect = 0.32
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 205  NGTTSLISFM*QPSLCANSFGFLGKAPIHTAALTVQTIMD 86
            N T  + SF+  P+LCA   G +   P+  AA  ++T+ +
Sbjct: 965  NYTRDVGSFLDHPTLCARCHGVIDLPPVPAAAAGIETLRE 1004


>03_06_0677 +
           35476009-35476014,35476974-35477474,35477574-35477762,
           35477925-35477945
          Length = 238

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 164 LMCQFLWFLRQGPYPYRSVNGTNNHG 87
           L  Q+    R+G  P RSVN  N+HG
Sbjct: 21  LYTQYFENARKGKSPGRSVNPNNHHG 46


>03_06_0636 -
           35215034-35215336,35215417-35215584,35215599-35215799,
           35215877-35215962,35216037-35216229,35216304-35216489
          Length = 378

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -2

Query: 275 SVINHASSTGNSVA-MSDGLEFC-SKRYHIIDFF 180
           SVI H SST NS A  S+  E C + +  +IDF+
Sbjct: 199 SVITHLSSTQNSPASSSESSENCHAAKAAVIDFY 232


>10_07_0042 -
           12298536-12298589,12298704-12298810,12298850-12298861,
           12299554-12300511
          Length = 376

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 212 CSKRYHIIDFFYVAAFLMCQFLWFLRQGPYPYRSV 108
           C K    +D   V + + C   WF+ Q P+   SV
Sbjct: 306 CIKPLSDVDILNVTSVVNCHEKWFIMQKPFSCISV 340


>08_02_1091 +
           24256025-24256190,24256806-24257978,24258066-24258733,
           24258994-24260065,24260241-24260563,24260647-24260835,
           24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 219 KPIGHCYRITCGGSMIDYA 275
           KP G CY   C GS+ D A
Sbjct: 887 KPSGVCYTSNCTGSITDLA 905


>08_01_0774 +
           7482311-7482919,7484012-7484077,7484211-7484384,
           7484473-7484603,7484726-7484802,7484981-7485064,
           7487885-7488066,7488189-7488266,7489813-7489945,
           7491610-7491670,7491861-7491942,7492143-7492271,
           7492510-7492653,7493102-7493204,7493382-7493513,
           7494127-7494485,7495149-7495229,7495384-7495450,
           7495636-7495706,7496087-7496178,7496365-7496458,
           7497692-7497789,7498206-7498341,7498599-7498618,
           7498781-7498876,7498973-7499060,7499171-7499288,
           7499738-7499759,7500203-7500326,7500625-7500702,
           7500837-7500955,7501816-7501869,7502260-7502362,
           7503133-7503261,7503345-7503453,7503788-7503819
          Length = 1424

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 201 VPHH*FLLCSSLPYVPIPLVS*ARPLSIPQ 112
           +PH  FL    +P+VP+P+   A P  +P+
Sbjct: 172 LPHMPFL--PMMPHVPVPMPPMASPAELPE 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,859,286
Number of Sequences: 37544
Number of extensions: 150717
Number of successful extensions: 288
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 279801164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)