Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E24
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        25   0.46 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   7.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   7.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 215 VMGDLTSGPVPNNSWLATKPIEVTNTHNTNYNKMYTHNTLP 337
           VM +L   PVP +S     P+    THN  +N   +H+  P
Sbjct: 318 VMTELYPSPVPGHSTSPNLPL----THNIAHNPYPSHSIYP 354


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +2

Query: 308 NKMYTHNTLPFIDQDDSFDTKFVSVTPREVESNDIIISEYIVHNDQTSK 454
           N++     L F+D + S   +F+ +T     +  +  S  +V +D+T K
Sbjct: 144 NELVFSEVLLFLDYNPSQKRQFLHITLASGRTLTVTPSHLLVLDDRTMK 192


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = -3

Query: 365 YQRSHLDQ*RAKCYACTFCCSWCY 294
           + +SH +  R  C  C++   +C+
Sbjct: 277 HMKSHSNVYRYSCRDCSYATKYCH 300


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/24 (25%), Positives = 13/24 (54%)
 Frame = -3

Query: 365 YQRSHLDQ*RAKCYACTFCCSWCY 294
           + +SH +  R  C  C++   +C+
Sbjct: 35  HMKSHSNVYRYSCRDCSYATKYCH 58


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 137 NQYLTHQDPNKVTFQEQFLDISKLPVVM 220
           NQ+L   DP  +  + +F +   L  VM
Sbjct: 328 NQWLGFDDPKSIQLKVEFANSKNLGGVM 355


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 137 NQYLTHQDPNKVTFQEQFLDISKLPVVM 220
           NQ+L   DP  +  + +F +   L  VM
Sbjct: 328 NQWLGFDDPKSIQLKVEFANSKNLGGVM 355


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 261 NHELLGTGPDVKSPITTGNLLISKNCSWN 175
           +H LLG  P     + +   L   + SWN
Sbjct: 351 SHNLLGKLPLTSLSLASAQTLSELDLSWN 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,971
Number of Sequences: 336
Number of extensions: 2936
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)