Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E24
         (577 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16120| Best HMM Match : efhand (HMM E-Value=0.0059)                 30   1.6  
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_31024| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-09)                 29   2.7  
SB_27804| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.8  
SB_27397| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.8  
SB_20524| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.8  
SB_5181| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.8  
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)                     28   6.3  
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_1121| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.3  

>SB_16120| Best HMM Match : efhand (HMM E-Value=0.0059)
          Length = 399

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 9   HYTHHSHPKGGMRLMLILPIRQAFITQHQ*IHFH 110
           HY HH HP   M  +  + I    IT H  +H H
Sbjct: 216 HYHHHKHPTRWMASLPAIAILTNTITIHHHLHHH 249


>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 385

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 8/128 (6%)
 Frame = +2

Query: 80  YNTTPVDPLSPNFEGFTPFNQYLTHQDPNKVTFQEQFLDISKLPVVMGDLTSGPVPNN-- 253
           +NT   + LS N    TP  + L+H  P K + Q      S         +S    ++  
Sbjct: 98  HNTPCKEQLSHN----TPCKEQLSHNTPCKSSCQTTHHARSSCHTTHSARSSCHTKHSTR 153

Query: 254 -SWLATKPIEVTNTHNTNYNKMYTHNTLPF----IDQDDSFDTKFVSVTP-REVESNDII 415
            S   T+P +   +HNT   +  +HNTLP     + Q +   +   +  P +E  S++ +
Sbjct: 154 SSCHTTQPCKKQLSHNTPCTEKLSHNTLPLQRVAVTQHNHAKSSCDTTEPCKEKLSHNTL 213

Query: 416 ISEYIVHN 439
             E + HN
Sbjct: 214 CKEKLSHN 221


>SB_31024| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-09)
          Length = 397

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
 Frame = +2

Query: 53  VNSSYQTGFYNTTPVDPLSPNFEGFTPFN--QYLTHQDPNKVTFQEQFLDISKLPVVMGD 226
           +NS +   FY+     P+S            +YLT   PNKV +++    + K+  + G 
Sbjct: 123 LNSDWACRFYSFFVTSPISTTITNLIVIGVERYLTIYRPNKVPYRKTCKRLVKVAWLAGV 182

Query: 227 LTSGPVPNNSWLATKPIEVTNTHNT 301
           + +   P +S    K  +V   H+T
Sbjct: 183 IVAMTYPGSSATLQK-FQVDEYHHT 206


>SB_27804| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 47

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 239 PVPNNSWLATKPIEVTNTHNTNYN 310
           P P ++W+  + +E TN  N N+N
Sbjct: 22  PNPRDTWITVQCVEQTNNDNRNFN 45


>SB_27397| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 103

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 239 PVPNNSWLATKPIEVTNTHNTNYN 310
           P P ++W+  + +E TN  N N+N
Sbjct: 22  PNPRDTWITVQCVEQTNNDNRNFN 45


>SB_20524| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 85

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 239 PVPNNSWLATKPIEVTNTHNTNYN 310
           P P ++W+  + +E TN  N N+N
Sbjct: 25  PNPRDTWITVQCVEQTNNDNRNFN 48


>SB_5181| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 47

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 239 PVPNNSWLATKPIEVTNTHNTNYN 310
           P P ++W+  + +E TN  N N+N
Sbjct: 22  PNPRDTWITVQCVEQTNNDNRNFN 45


>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 759

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 320 THNTLPFIDQDDSFDTKFVSVTPREVESNDIIISE 424
           T  T+ F    D F    V++TPR+  S DI+++E
Sbjct: 19  TSKTVIFYKNGDVFSKYPVTITPRKYRSFDILLAE 53


>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 583

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
 Frame = +2

Query: 329 TLPFIDQ----DDSFDTKFVSVTPREVESNDIIIS 421
           ++PF D     DD+ D  ++ V   E+E ND+I++
Sbjct: 295 SVPFWDDNEYYDDTIDNNYIDVVADEIERNDLIMT 329


>SB_1121| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 219

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
 Frame = +2

Query: 8   TLHTPLSPQGWDAFDVNSSYQTGFYNTTPVDPLSPNFEGFTPFNQYL---THQDPNKV-T 175
           T ++PL    +D+     ++ +    TTP  PL  +    TP   +L   TH   +++ T
Sbjct: 60  TPYSPLHMHTYDSIFTLHTHDSIRTPTTPYSPLHTHDSIPTPTYPHLRLHTHHSISRLYT 119

Query: 176 FQEQFLDISKL-PVVMGDLTSGPVPNNSWLATKPIEVTNTHNTNYNKMYTHNTL 334
           +   F+  +   P+   D  S P P   +      +  +TH T Y+ ++ H+++
Sbjct: 120 YTYDFIPTTPYSPLHTHD--SIPTPTTPYSPLHIPDSISTHTTPYSPLHIHDSI 171


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,676,290
Number of Sequences: 59808
Number of extensions: 356333
Number of successful extensions: 858
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)