BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E24
(577 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p pro... 34 0.12
AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA... 34 0.12
AY069112-1|AAL39257.1| 719|Drosophila melanogaster GH12815p pro... 31 0.85
AE014296-1532|AAN11999.1| 719|Drosophila melanogaster CG32026-P... 31 0.85
BT010065-1|AAQ22534.1| 323|Drosophila melanogaster LD13945p pro... 29 4.5
AY071301-1|AAL48923.1| 783|Drosophila melanogaster RE32990p pro... 29 4.5
AF197059-1|AAF62399.1| 783|Drosophila melanogaster retinoblasto... 29 4.5
AF195899-1|AAF66827.1| 782|Drosophila melanogaster RB-related p... 29 4.5
AF001464-1|AAB58237.1| 323|Drosophila melanogaster caspase-1 pr... 29 4.5
AE014297-2127|AAF55258.1| 783|Drosophila melanogaster CG5083-PA... 29 4.5
AE013599-3628|AAF47027.1| 323|Drosophila melanogaster CG5370-PA... 29 4.5
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 6.0
AY061485-1|AAL29033.1| 867|Drosophila melanogaster LD45056p pro... 28 7.9
AE014134-359|AAF51288.2| 867|Drosophila melanogaster CG7074-PA ... 28 7.9
>BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p protein.
Length = 2727
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 149 THQDPNKVTFQEQFLDISKLPVVMGDL-TSGPVPNNSWLATKPIEVTNTHNTNYNKMYTH 325
T D +V+ E FL+ + P ++GDL + ++ E NT M +
Sbjct: 1885 TSSDSEQVSL-EDFLESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEVGNTLLQVMVSR 1943
Query: 326 NTLPFIDQDDSFDTKFVSVTPREVESNDIII 418
N L F+D D++ + + V VT R+ ++ ++
Sbjct: 1944 NLLTFMD-DEAMENRLVGVTKRKSWDDEFVL 1973
>AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA
protein.
Length = 2727
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 149 THQDPNKVTFQEQFLDISKLPVVMGDL-TSGPVPNNSWLATKPIEVTNTHNTNYNKMYTH 325
T D +V+ E FL+ + P ++GDL + ++ E NT M +
Sbjct: 1885 TSSDSEQVSL-EDFLESCRAPALLGDLDDEDDMDEDNDEEENEDEYEEVGNTLLQVMVSR 1943
Query: 326 NTLPFIDQDDSFDTKFVSVTPREVESNDIII 418
N L F+D D++ + + V VT R+ ++ ++
Sbjct: 1944 NLLTFMD-DEAMENRLVGVTKRKSWDDEFVL 1973
>AY069112-1|AAL39257.1| 719|Drosophila melanogaster GH12815p
protein.
Length = 719
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 419 SEYIVHNDQTSKGD--LQELGVERRSSGLSVDVGARPPAWPTDSISTP 556
SEYI+H D SK +Q ER S + G +PP P STP
Sbjct: 222 SEYIIHWDSESKNPSGIQSQQPERCESAGNPPSGGKPPTKPPTGPSTP 269
>AE014296-1532|AAN11999.1| 719|Drosophila melanogaster CG32026-PA
protein.
Length = 719
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 419 SEYIVHNDQTSKGD--LQELGVERRSSGLSVDVGARPPAWPTDSISTP 556
SEYI+H D SK +Q ER S + G +PP P STP
Sbjct: 222 SEYIIHWDSESKNPSGIQSQQPERCESAGNPPSGGKPPTKPPTGPSTP 269
>BT010065-1|AAQ22534.1| 323|Drosophila melanogaster LD13945p
protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 212 VVMGDLTSGPVPNNSWLATKPIEVTNTHNTNYNKMYTHNTLPFIDQDDSFD 364
VV G + P+P N ++A P+E + + YN + H + I + FD
Sbjct: 43 VVGGATAASPLPANKFVARMPVE---RYASEYNMSHKHRGVALIFNHEFFD 90
>AY071301-1|AAL48923.1| 783|Drosophila melanogaster RE32990p
protein.
Length = 783
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 234 DVKSPITTGNLLISKNCSWNVTL 166
D++ I N ++KNC WNV+L
Sbjct: 73 DIRESINEANDSVAKNCCWNVSL 95
>AF197059-1|AAF62399.1| 783|Drosophila melanogaster retinoblastoma
protein homologRBF2 protein.
Length = 783
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 234 DVKSPITTGNLLISKNCSWNVTL 166
D++ I N ++KNC WNV+L
Sbjct: 73 DIRESINEANDSVAKNCCWNVSL 95
>AF195899-1|AAF66827.1| 782|Drosophila melanogaster RB-related
protein RBF2 protein.
Length = 782
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 234 DVKSPITTGNLLISKNCSWNVTL 166
D++ I N ++KNC WNV+L
Sbjct: 73 DIRESINEANDSVAKNCCWNVSL 95
>AF001464-1|AAB58237.1| 323|Drosophila melanogaster caspase-1
protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 212 VVMGDLTSGPVPNNSWLATKPIEVTNTHNTNYNKMYTHNTLPFIDQDDSFD 364
VV G + P+P N ++A P+E + + YN + H + I + FD
Sbjct: 43 VVGGATAASPLPANKFVARMPVE---RYASEYNMSHKHRGVALIFNHEFFD 90
>AE014297-2127|AAF55258.1| 783|Drosophila melanogaster CG5083-PA
protein.
Length = 783
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 234 DVKSPITTGNLLISKNCSWNVTL 166
D++ I N ++KNC WNV+L
Sbjct: 73 DIRESINEANDSVAKNCCWNVSL 95
>AE013599-3628|AAF47027.1| 323|Drosophila melanogaster CG5370-PA
protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 212 VVMGDLTSGPVPNNSWLATKPIEVTNTHNTNYNKMYTHNTLPFIDQDDSFD 364
VV G + P+P N ++A P+E + + YN + H + I + FD
Sbjct: 43 VVGGATAASPLPANKFVARMPVE---RYASEYNMSHKHRGVALIFNHEFFD 90
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/85 (24%), Positives = 32/85 (37%)
Frame = +2
Query: 140 QYLTHQDPNKVTFQEQFLDISKLPVVMGDLTSGPVPNNSWLATKPIEVTNTHNTNYNKMY 319
+Y Q N+ + +F DI G T+ S+ TK + T
Sbjct: 3972 KYTVMQLANQTEMRTRFTDIEAENETTGPYTT---TTESYKTTKQLSSNPETETPTTLPS 4028
Query: 320 THNTLPFIDQDDSFDTKFVSVTPRE 394
T PF DQ F ++ ++TP E
Sbjct: 4029 RPTTRPFTDQTTEFTSEIPTITPME 4053
>AY061485-1|AAL29033.1| 867|Drosophila melanogaster LD45056p
protein.
Length = 867
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -2
Query: 513 PTSTDKPELRLSTPNSCKSPLLV*SLCTMYSEMIMSLLSTSRGVTET 373
P ST RLS+ SC+ PL SLC M+ + ++++ S G T T
Sbjct: 758 PRSTTTSTNRLSSCPSCRKPLPRCSLCLMH---MGTMVNMSNGETPT 801
>AE014134-359|AAF51288.2| 867|Drosophila melanogaster CG7074-PA
protein.
Length = 867
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -2
Query: 513 PTSTDKPELRLSTPNSCKSPLLV*SLCTMYSEMIMSLLSTSRGVTET 373
P ST RLS+ SC+ PL SLC M+ + ++++ S G T T
Sbjct: 758 PRSTTTSTNRLSSCPSCRKPLPRCSLCLMH---MGTMVNMSNGETPT 801
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,675,225
Number of Sequences: 53049
Number of extensions: 522095
Number of successful extensions: 1591
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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