Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E21
         (444 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    44   5e-05
U67957-1|AAB07587.2|  324|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical p...    28   3.5  
AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical ...    28   3.5  
U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical p...    27   4.6  
Z73428-1|CAA97807.1|  219|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z69788-2|CAA93645.1|  303|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U32854-1|AAC46919.1|  219|Caenorhabditis elegans unc-119 protein.      27   8.1  
U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF016447-4|AAG24011.2|  352|Caenorhabditis elegans Serpentine re...    27   8.1  

>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +3

Query: 270 DDNDQLTTIAGNYCRDYIRGYCTRDN-CRYIH--EIPPIAFLKDLFRFCHDFQNKGCYR 437
           + N Q      + CRD+++  C R + C++ H  E PPI+     + FC D+QN+GC R
Sbjct: 46  EHNKQQQQQRDDVCRDFLKNICNRGSRCKFYHPSEAPPIS--DHDYNFCIDYQNRGCQR 102



 Score = 33.5 bits (73), Expect = 0.071
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 303 NYCRDYIRGYCTRDNCRYIH 362
           N+C DY    C RDNCR++H
Sbjct: 90  NFCIDYQNRGCQRDNCRFVH 109


>U67957-1|AAB07587.2|  324|Caenorhabditis elegans Hypothetical
           protein K02H8.1 protein.
          Length = 324

 Score = 31.1 bits (67), Expect = 0.38
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 309 CRDYIRGYCTRDN--CRYIHEIPPIAFLKDLFRFCHDFQNKGCYR 437
           CR+++RG C R +  C++ H  P +   +     C+D     C R
Sbjct: 44  CREFLRGQCARSDQECKFAHPPPNVDVQQGRVTACYDSIKGRCTR 88



 Score = 29.9 bits (64), Expect = 0.87
 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 309 CRDYIRGYCTRDN--CRYIHEIPP 374
           C D I+G CTR+N  C+Y+H  PP
Sbjct: 78  CYDSIKGRCTRENPKCKYLH--PP 99


>Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 375 SVESHVYICNYLACNNHECN 316
           S+  HV  CNY+ C N  CN
Sbjct: 84  SIYMHVVGCNYVICANSACN 103


>AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 375 SVESHVYICNYLACNNHECN 316
           S+  HV  CNY+ C N  CN
Sbjct: 84  SIYMHVVGCNYVICANSACN 103


>U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical
           protein B0507.1 protein.
          Length = 615

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +3

Query: 264 MTDDNDQLTTIAGNYC-RDYIRG--YCTRDNCRYIHEI 368
           M D N  +     N C +DY+     CT DNCR I++I
Sbjct: 544 MCDPNTHVCCKGTNRCPKDYVETGEQCTDDNCRGINQI 581


>Z73428-1|CAA97807.1|  219|Caenorhabditis elegans Hypothetical
           protein M142.1 protein.
          Length = 219

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = +3

Query: 309 CRDYIRGYC---TRDNCRYIHEIPPIA 380
           C D+  G+C   +R+NC +I+E P ++
Sbjct: 155 CFDFEFGFCMPNSRNNCEHIYEFPQLS 181


>Z69788-2|CAA93645.1|  303|Caenorhabditis elegans Hypothetical
           protein F09A5.3 protein.
          Length = 303

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 282 QLTTIAGNYCRDYIRGYCTRDNCRYIHEI 368
           ++T +   Y  +  R YCTR NC +  E+
Sbjct: 23  KMTNLQSRYDDELKRCYCTRRNCNFSCEV 51


>U32854-1|AAC46919.1|  219|Caenorhabditis elegans unc-119 protein.
          Length = 219

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = +3

Query: 309 CRDYIRGYC---TRDNCRYIHEIPPIA 380
           C D+  G+C   +R+NC +I+E P ++
Sbjct: 155 CFDFEFGFCMPNSRNNCEHIYEFPQLS 181


>U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical
           protein F40B5.2b protein.
          Length = 441

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 317 ISAIITGDCSQLIIIVRHSVIWVSRHNHRLIDFHTVIL*STDM 189
           I+ I+ G     I I R S   V+  +HRL+  HT+++ ST M
Sbjct: 7   IAIIVIGFIHVSIAIARKSTDGVA--HHRLVRLHTILITSTAM 47


>U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical
           protein F40B5.2a protein.
          Length = 468

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 317 ISAIITGDCSQLIIIVRHSVIWVSRHNHRLIDFHTVIL*STDM 189
           I+ I+ G     I I R S   V+  +HRL+  HT+++ ST M
Sbjct: 7   IAIIVIGFIHVSIAIARKSTDGVA--HHRLVRLHTILITSTAM 47


>AF016447-4|AAG24011.2|  352|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 18 protein.
          Length = 352

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -2

Query: 308 IITGDCSQLIIIVRHSVIWVSRH---NHRLIDFHTVIL*STDMNKKGQLSVIP*LYFCXF 138
           I+     QLI+I    +IWV R+   N  L+    V + S +   K  ++V P  + C F
Sbjct: 162 ILAAQICQLIVISSLIIIWVYRNEEPNTYLLSCLNVPVASVEDMAKATIAVFPINFICFF 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,457,150
Number of Sequences: 27780
Number of extensions: 185202
Number of successful extensions: 376
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)