Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E21
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   0.65 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   4.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   4.6  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   8.0  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   8.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   8.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   8.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   8.0  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 357 YICNYLACNNHECNLGNNYRRL 292
           Y  NY   NN+  N  NNY++L
Sbjct: 330 YNNNYNNYNNYNNNYNNNYKKL 351


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 333 NNHECNLGNNYRRL 292
           NN+  N  NNY++L
Sbjct: 103 NNYNNNYNNNYKKL 116


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 333 NNHECNLGNNYRRL 292
           NN+  N  NNY++L
Sbjct: 103 NNYNNNYNNNYKKL 116


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 235 IV*LIFIQLFYDQLI 191
           ++ LIFI LFY +L+
Sbjct: 230 VIPLIFIILFYSRLL 244


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 324 ECNLGNNY 301
           ECN+GN Y
Sbjct: 125 ECNIGNKY 132


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 324 ECNLGNNY 301
           ECN+GN Y
Sbjct: 125 ECNIGNKY 132


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 235 IV*LIFIQLFYDQLI 191
           ++ LIFI LFY +L+
Sbjct: 230 VIPLIFIILFYSRLL 244


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 266 HSVIWVSRHNHRLID 222
           H++I++S   HR ID
Sbjct: 260 HTIIYLSAKGHRPID 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,019
Number of Sequences: 438
Number of extensions: 2177
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)