Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E20
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.72 
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    25   0.72 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   3.8  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 327 QIKT-FKEMNERLLSEVESLKALNERLLSENAALRSEAAARSVPEAQ 464
           QIK  F+    +L  E++++K LNE+   + A  +  AAA +   AQ
Sbjct: 266 QIKIWFQNRRMKLKKEIQAIKELNEQ--EKQAQAQKAAAAAAAVAAQ 310


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 327 QIKT-FKEMNERLLSEVESLKALNERLLSENAALRSEAAARSVPEAQ 464
           QIK  F+    +L  E++++K LNE+   + A  +  AAA +   AQ
Sbjct: 48  QIKIWFQNRRMKLKKEIQAIKELNEQ--EKQAQAQKAAAAAAAVAAQ 92


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 189 SPAPSRKRRLDHLSWEEKMQRKKLKNRVAA 278
           +PA   + R DHL  E  +  +++ N  AA
Sbjct: 16  APAEFYESRYDHLDVESILNNRRMVNYYAA 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,690
Number of Sequences: 336
Number of extensions: 2771
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)