Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E20
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_52195| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_39810| Best HMM Match : Pam16 (HMM E-Value=8.3) 33 0.27
SB_29963| Best HMM Match : E-MAP-115 (HMM E-Value=1.6) 30 1.4
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_34772| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_19861| Best HMM Match : DUF465 (HMM E-Value=6.1) 29 2.5
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 2.5
SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_52107| Best HMM Match : DUF833 (HMM E-Value=1.6e-09) 29 4.4
SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19) 28 5.8
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_38618| Best HMM Match : PhdYeFM (HMM E-Value=3.1) 28 5.8
SB_45210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 28 7.6
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 28 7.6
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_33493| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 28 7.6
>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 240 KMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVESLKAL 392
K +RKKL+NR+AA ++K K+ N +L+SE + L+ L
Sbjct: 134 KNERKKLRNRLAASKCRKRKLEKEAELEDKVKVLKDKNTKLVSEAQELRRL 184
>SB_52195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1173
Score = 33.1 bits (72), Expect = 0.20
Identities = 11/33 (33%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = -1
Query: 654 LSCSTCINLLEEGVCKL--IEGIEYSSESKCAR 562
++C++C+N +E+ + KL ++ ++ S + KCAR
Sbjct: 224 MTCNSCVNTIEKNISKLDGVQSVKVSLDDKCAR 256
>SB_39810| Best HMM Match : Pam16 (HMM E-Value=8.3)
Length = 177
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 FKEMNERLLSEVESLKALNERLLSENAA-LRSEAAARSVPEAQRPAESTPRQKEGHP 506
FK E LS+VE L + + SEN LRS+A + A+ ++ PR + HP
Sbjct: 91 FKTYEELYLSKVEREDRLEQGIQSENMRKLRSKAGDKETSNAKENSKRRPRGEVHHP 147
>SB_29963| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
Length = 238
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 324 SQIKTFKEMNERLLSEVESLKALNERLLSENAAL 425
SQI FK E+ E++ L+ N+RL EN+AL
Sbjct: 192 SQIDDFKSKLEKANKELDQLRLDNQRLKDENSAL 225
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 513 PPPGALPSAEE*TL-LVFGPPGRFAPPPHCAALR 415
PPPG +P L F PPG PPP +R
Sbjct: 223 PPPGGMPPGRMPPQGLPFPPPGPIPPPPGAGGMR 256
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Frame = +3
Query: 324 SQIKTFKEMNERLLSEVESL-------KALNERLLSENAALRSE-AAARSVPEAQRP 470
++I+ K+ NERL E+E L +A ER+L ENA L+ E A ++ +A +P
Sbjct: 478 AEIQGLKDDNERLEDELEDLSTTIKRGRAEYERILKENAELKDENEALKAEIDALKP 534
>SB_34772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 636 INLLEEGVCKLIEGIEYSSESKC 568
++ +EEGVC + EG+ Y E C
Sbjct: 19 VHYMEEGVCYMEEGVHYMEEGVC 41
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 636 INLLEEGVCKLIEGIEYSSESKC 568
++ +EEGVC + EG+ Y E C
Sbjct: 82 VHYMEEGVCYMEEGVHYMEEGVC 104
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -1
Query: 627 LEEGVCKLIEGIEYSSESKCARRSARGDTSPAVCEPRE 514
+EEGVC + EG+ Y E C VC E
Sbjct: 8 MEEGVCYMEEGVHYMEEGVCYMEEGVHYMEEGVCYMEE 45
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 627 LEEGVCKLIEGIEYSSESKC 568
+EEGVC + EG+ Y E C
Sbjct: 71 MEEGVCYMEEGVHYMEEGVC 90
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 636 INLLEEGVCKLIEGIEYSSESKCARRSARGDTSPAVCEPRE 514
++ +EEGVC + EG+ Y E C VC E
Sbjct: 54 VHYMEEGVCFMEEGVCYMEEGVCYMEEGVHYMEEGVCYMEE 94
>SB_19861| Best HMM Match : DUF465 (HMM E-Value=6.1)
Length = 75
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Frame = +3
Query: 336 TFKEMNERLLSEVESLKALNE---RLLSENAALRSEAAARSVPEAQ 464
T +E+N +L ++ ++LKA+ E RL SEN A+ +E +A+ + AQ
Sbjct: 17 THEELNIKLSAQEKALKAMTEERDRLKSENEAM-NELSAKKIQLAQ 61
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 324 SQIKTFKEMNERLLSEVESLKALNERLLSENAALRSEAAARSVPEAQRPAESTPRQ-KEG 500
SQ++ KE L +V+ L+ N L EN+ L+ E + R + E Q + ++ E
Sbjct: 984 SQVRAAKEQASFLQGQVQGLEINNSNLTVENSKLKRE-SERQIKELQEILGTLRKELDEA 1042
Query: 501 HPEAVRAARILLV 539
H +A A LV
Sbjct: 1043 HNQARSACANELV 1055
>SB_23320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Frame = +3
Query: 336 TFKEMNERLLSEVESLKALNE---RLLSENAALRSEAAARSVPEAQ 464
T +E+N +L ++ ++LKA+ E RL SEN A+ +E +A+ + AQ
Sbjct: 849 THEELNIKLSAQEKALKAMTEERDRLKSENEAM-NELSAKKIQLAQ 893
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 642 TCINLLEEGVCKLIEGIEYSSESKCARRSARGDTSPAVCEPREPP----PGALPSAEE*T 475
T L + + I+ S++S +S DT P +P PP G+LP E
Sbjct: 1680 TAAKTLPSSIKSSTQPIKSSTQSSKRSQSEYQDTGPPNFKPPPPPGSHKHGSLPLPLEDP 1739
Query: 474 LLVFGPPGRFAPPP 433
L+ GRF PPP
Sbjct: 1740 LI----KGRFTPPP 1749
>SB_52107| Best HMM Match : DUF833 (HMM E-Value=1.6e-09)
Length = 624
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +3
Query: 357 RLLSEVESLKALNERLLSE--NAALRSEAAARSVPE 458
RL SE++ LKA+NERL+++ N+ +++ AR + E
Sbjct: 340 RLGSELQELKAVNERLVTQLRNSREQNQLLARLIAE 375
>SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19)
Length = 104
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 366 SEVESLKALNERLLSENAALRSEA 437
+E+ L+ LNE+L SEN LR E+
Sbjct: 43 TEIAELQVLNEKLQSENRRLRGES 66
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Frame = -1
Query: 597 GIEYSSESKCARRSARGDTSPAVCEPREPP---PGALPSAEE*TLLVFGPPGRFAPPPHC 427
G ++ S G SP + EP + P PG P + PG F P
Sbjct: 549 GFQHQQRPGAPPTSQPGFPSPQMQEPMQLPTSQPGGFPPQQRPGAPPTSQPGGFPPQRPG 608
Query: 426 AALRSHSTNVRLKPSGFP 373
S +++ ++PSG P
Sbjct: 609 MPPMSQPSSMHMQPSGQP 626
>SB_38618| Best HMM Match : PhdYeFM (HMM E-Value=3.1)
Length = 370
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2
Query: 581 QNRSVRGGLREETHHQQYASRANRLRVPFLLPRSRLCWSLGLRDASRRRLTAQRCVLTQQ 402
+NR ++ LR H+Q SRA RLR L R R + LR L QR ++ +Q
Sbjct: 164 RNRRLKKSLRRSEKHKQGLSRAARLR----LIRERKAFLRRLRQQRLAWLKRQRQLINRQ 219
>SB_45210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 375 ESLKALNERLLS-ENAALRSEAAARSVPEAQRPAESTPRQKEGHPEAVR 518
E L AL + +++ E++ LRS + + S+ +Q PR GH E+++
Sbjct: 280 ELLDALRDLVIAGEDSPLRSPSPSTSLSGSQSEVAELPRTPTGHKESLK 328
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 27.9 bits (59), Expect = 7.6
Identities = 7/23 (30%), Positives = 18/23 (78%)
Frame = +3
Query: 210 RRLDHLSWEEKMQRKKLKNRVAA 278
+R+DH++W+ +M KK+++ ++
Sbjct: 793 KRIDHMTWKSEMMEKKMQDMASS 815
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 324 SQIKTFKEMNERLLSEVESLKALNERLLSENAALRSEA--AARSVPEAQRPA-ESTPRQK 494
S ++ N++L++ ++ KAL ++L + A L+ EA AA S P Q TP +
Sbjct: 504 SSLRRLDVENKKLVASIDDNKALIDQLKNNIALLQREAAEAATSTPVRQDDTLPPTPSRS 563
Query: 495 EGH 503
H
Sbjct: 564 RAH 566
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 360 LLSEVESLKALNERLLSENAALRSEAAARS 449
L ++ LKA NE LL +NA R++A + S
Sbjct: 211 LQKQISDLKATNEVLLEQNARYRNQANSAS 240
>SB_33493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 551 EETHHQQYASRANRLRVPF 495
E+T HQQY S +LR+PF
Sbjct: 27 EKTAHQQYGSTLVQLRIPF 45
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = -1
Query: 537 PAVCEPREPPPGALPSAEE*TLLVFGPPGRFAPPPHCAALRSHSTNVRLKPSG 379
P V P PPG LP PPG PPP +++ N+ +G
Sbjct: 184 PGVLAPPPAPPGVLPPPP-------APPGALIPPPPAPPTFNNNQNMGYPSNG 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,153,724
Number of Sequences: 59808
Number of extensions: 361831
Number of successful extensions: 3899
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3881
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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