Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E20
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical p... 58 5e-09
Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding... 58 5e-09
AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding... 58 5e-09
U23179-12|AAN63445.1| 224|Caenorhabditis elegans Hypothetical p... 33 0.13
U23179-11|AAN63447.1| 293|Caenorhabditis elegans Hypothetical p... 33 0.13
U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical p... 33 0.13
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 31 0.71
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 31 0.94
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 31 0.94
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 29 3.8
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 29 3.8
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 29 3.8
Z78019-2|CAB01451.1| 347|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 28 5.0
AC024751-8|AAK21510.3| 369|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81045-5|CAB02815.1| 322|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 8.8
CU457741-16|CAM36358.1| 312|Caenorhabditis elegans Hypothetical... 27 8.8
AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical
protein R74.3b protein.
Length = 287
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 198 PSRKRRLDHLSWEEKMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVE 377
P ++ RL+HLS EEKM R+KLKNRVAAQ + ++ E N RL +E E
Sbjct: 49 PRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENE 108
Query: 378 SLKALNERLLSE 413
L+ N+ L+++
Sbjct: 109 RLRRQNKNLMNQ 120
>Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical
protein R74.3a protein.
Length = 335
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 198 PSRKRRLDHLSWEEKMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVE 377
P ++ RL+HLS EEKM R+KLKNRVAAQ + ++ E N RL +E E
Sbjct: 49 PRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENE 108
Query: 378 SLKALNERLLSE 413
L+ N+ L+++
Sbjct: 109 RLRRQNKNLMNQ 120
>AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding
protein processedisoform protein.
Length = 285
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 198 PSRKRRLDHLSWEEKMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVE 377
P ++ RL+HLS EEKM R+KLKNRVAAQ + ++ E N RL +E E
Sbjct: 49 PRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENE 108
Query: 378 SLKALNERLLSE 413
L+ N+ L+++
Sbjct: 109 RLRRQNKNLMNQ 120
>AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding
protein unprocessedisoform protein.
Length = 287
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 198 PSRKRRLDHLSWEEKMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVE 377
P ++ RL+HLS EEKM R+KLKNRVAAQ + ++ E N RL +E E
Sbjct: 49 PRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKIEDVMRDLVEENRRLRAENE 108
Query: 378 SLKALNERLLSE 413
L+ N+ L+++
Sbjct: 109 RLRRQNKNLMNQ 120
>U23179-12|AAN63445.1| 224|Caenorhabditis elegans Hypothetical
protein C27D6.4a protein.
Length = 224
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 240 KMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVESLKALNERL 404
K+ R+K+KN+++AQ S ++ F E N+ L +V L+A N L
Sbjct: 157 KIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDL 211
>U23179-11|AAN63447.1| 293|Caenorhabditis elegans Hypothetical
protein C27D6.4c protein.
Length = 293
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 240 KMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVESLKALNERL 404
K+ R+K+KN+++AQ S ++ F E N+ L +V L+A N L
Sbjct: 226 KIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDL 280
>U23179-10|AAN63446.1| 329|Caenorhabditis elegans Hypothetical
protein C27D6.4b protein.
Length = 329
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 240 KMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVESLKALNERL 404
K+ R+K+KN+++AQ S ++ F E N+ L +V L+A N L
Sbjct: 262 KIVRRKIKNKLSAQESRRKRKEYIDALEGRLHCFSEENKSLKKQVHQLEASNRDL 316
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +3
Query: 240 KMQRKKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNERLLSEVESLKALNERLLSENA 419
K R+K++N+ +AQTS ++ + N+ L ++E L + N+ ++S+
Sbjct: 286 KRIRRKIRNKRSAQTSRKRKQDYIEQLEDRVSESTKENQALKQQIERLSSENQSVISQLK 345
Query: 420 ALRSE 434
L+++
Sbjct: 346 KLQAQ 350
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 30.7 bits (66), Expect = 0.94
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = -1
Query: 645 STCINLLEEGVCKLIEGI---EYSSESKCARRSARGDTSPAVCEPREPPPGALPSAEE*T 475
+T N ++ G L+ + +++ E A + + A P + PP ++PS
Sbjct: 373 ATLPNFVQNGTAPLVPTVSAQQFTPEQLAAAFAQQQIAQSAAPTPFDSPPPSMPSTSS-- 430
Query: 474 LLVFGPPGRFAPPPHCAALRSHSTNVRLKPSGFP 373
GP G APPP SH R+ +G+P
Sbjct: 431 ----GPSGALAPPPP----PSHPIPRRVSGNGWP 456
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 30.7 bits (66), Expect = 0.94
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = -1
Query: 645 STCINLLEEGVCKLIEGI---EYSSESKCARRSARGDTSPAVCEPREPPPGALPSAEE*T 475
+T N ++ G L+ + +++ E A + + A P + PP ++PS
Sbjct: 401 ATLPNFVQNGTAPLVPTVSAQQFTPEQLAAAFAQQQIAQSAAPTPFDSPPPSMPSTSS-- 458
Query: 474 LLVFGPPGRFAPPPHCAALRSHSTNVRLKPSGFP 373
GP G APPP SH R+ +G+P
Sbjct: 459 ----GPSGALAPPPP----PSHPIPRRVSGNGWP 484
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 30.7 bits (66), Expect = 0.94
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = -1
Query: 645 STCINLLEEGVCKLIEGI---EYSSESKCARRSARGDTSPAVCEPREPPPGALPSAEE*T 475
+T N ++ G L+ + +++ E A + + A P + PP ++PS
Sbjct: 373 ATLPNFVQNGTAPLVPTVSAQQFTPEQLAAAFAQQQIAQSAAPTPFDSPPPSMPSTSS-- 430
Query: 474 LLVFGPPGRFAPPPHCAALRSHSTNVRLKPSGFP 373
GP G APPP SH R+ +G+P
Sbjct: 431 ----GPSGALAPPPP----PSHPIPRRVSGNGWP 456
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 252 KKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNER---LLSEVESLKALNERLLSENAA 422
+KLK+++A S + K +E+N+R L++E E +K NE L +
Sbjct: 147 RKLKDKLAKLESEQDIFIENAVNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDS 206
Query: 423 LRSEAAARSVPEAQRPAESTPRQKEG 500
L E+ + + A+ T QK+G
Sbjct: 207 L--ESKNKDIQRKLEIAKQTVEQKDG 230
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 252 KKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNER---LLSEVESLKALNERLLSENAA 422
+KLK+++A S + K +E+N+R L++E E +K NE L +
Sbjct: 147 RKLKDKLAKLESEQDIFIENAVNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDS 206
Query: 423 LRSEAAARSVPEAQRPAESTPRQKEG 500
L E+ + + A+ T QK+G
Sbjct: 207 L--ESKNKDIQRKLEIAKQTVEQKDG 230
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 252 KKLKNRVAAQTSXXXXXXXXXXXXSQIKTFKEMNER---LLSEVESLKALNERLLSENAA 422
+KLK+++A S + K +E+N+R L++E E +K NE L +
Sbjct: 147 RKLKDKLAKLESEQDIFIENAVNEVEKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDS 206
Query: 423 LRSEAAARSVPEAQRPAESTPRQKEG 500
L E+ + + A+ T QK+G
Sbjct: 207 L--ESKNKDIQRKLEIAKQTVEQKDG 230
>Z78019-2|CAB01451.1| 347|Caenorhabditis elegans Hypothetical
protein ZK863.5 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 309 FLLSSCHATFAPLRDSSTFFFAFFLPMINDLNGVFSMEP 193
FLL +P+ +S T FA +P+IN L V ++P
Sbjct: 249 FLLGQLRIVESPVLESFTLLFAVLVPVINPLITVTFIKP 287
>Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 618 GVCKLIEGIEYSSESKCARRSARGDTSPAVCEPREPPPG-ALPSAEE*TLLVFGPPG 451
G+C + E+ + R R D + V EPR LPS +L +F P G
Sbjct: 165 GICNNVARPEWGASHTPMARIVRPDYADGVSEPRAAAASKPLPSVRSLSLTIFTPRG 221
>Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 618 GVCKLIEGIEYSSESKCARRSARGDTSPAVCEPREPPPG-ALPSAEE*TLLVFGPPG 451
G+C + E+ + R R D + V EPR LPS +L +F P G
Sbjct: 165 GICNNVARPEWGASHTPMARIVRPDYADGVSEPRAAAASKPLPSVRSLSLTIFTPRG 221
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 468 VFGPPGRFAPPPHCAALRSHSTNVRLKPS 382
+F P G PP CA L + S NVR P+
Sbjct: 466 IFFPTGYPFSPPKCAFLTTGSGNVRFNPN 494
>AC024751-8|AAK21510.3| 369|Caenorhabditis elegans Hypothetical
protein Y18H1A.7 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 366 SEVESLKALNERLLSENAALRSEAAARSVPEAQRPAESTPRQKEGHPEAVRA 521
S+ LK LN ++ +S A+S P+ ++P E E PE +
Sbjct: 68 SQEAQLKRLNNEEAGSSSCRKSPETAKSTPKVRKPVEIPKISSEKLPETANS 119
>Z81045-5|CAB02815.1| 322|Caenorhabditis elegans Hypothetical
protein C36F7.5 protein.
Length = 322
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 603 IEGIEYSSESKCARRSARGDTSPAVCEPREPPPGALPSAE 484
+E E S++S +S +G++SP PP A P+A+
Sbjct: 35 LENSEASTKSGKTGKSDKGESSPTPASKDAPPAPAAPNAK 74
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 470 SRVYSSAEGRAPGGGSRGSHTAGDVSPLAD 559
S Y S + PGGG R +G +PL D
Sbjct: 178 SEFYESMANQIPGGGGRRMSQSGRTTPLHD 207
>CU457741-16|CAM36358.1| 312|Caenorhabditis elegans Hypothetical
protein C42C1.15 protein.
Length = 312
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 354 ERLLSEVESLKALNERLLSENAALRSEAAARSVPEAQRPAES 479
+RLLSE E+ K LN+ N A A +AQ+ A+S
Sbjct: 228 KRLLSEKETEKLLNQMEAESNLASERSKADAEFYKAQKQADS 269
>AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical
protein Y105E8A.9 protein.
Length = 829
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 345 EMNERLLSEVESLKALNERLLSENAALRSEAAARSVPEAQR---PAESTPRQKEGHPEAV 515
EM L +EVE + N L + AAL + R VPE P + ++ H +
Sbjct: 155 EMCRDLANEVEKIIKQNNAYLKKKAALCAFRIVRKVPELMEVFIPCTRSLLGEKNHGVLM 214
Query: 516 RAARILLVMC 545
A ++ MC
Sbjct: 215 GATTLVTEMC 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,481,048
Number of Sequences: 27780
Number of extensions: 271272
Number of successful extensions: 1034
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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