Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E19
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0422 - 22018579-22018698,22019548-22019644,22019744-220199... 40 0.002
02_02_0103 + 6797830-6798433,6799412-6799480,6799573-6799664,679... 36 0.014
06_03_1213 - 28463774-28464286 36 0.025
01_01_0226 - 1930276-1930821 32 0.23
04_04_1618 + 34822644-34822915,34823008-34823369,34824721-348247... 31 0.53
05_04_0127 - 18262499-18263104 31 0.70
08_01_0626 - 5445676-5446687,5447099-5447430 30 0.93
03_05_0917 + 28774068-28774128,28774293-28774392,28774413-287750... 30 0.93
09_04_0098 - 14580949-14581176,14581213-14581470 30 1.2
06_03_0295 - 19235755-19235949,19236330-19236548,19237297-19237503 29 2.8
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 27 6.5
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 27 6.5
01_06_0644 + 30821811-30821855,30822707-30822976,30823079-308243... 27 6.5
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 27 8.7
06_02_0139 + 12247051-12247155,12247250-12247327,12247412-122475... 27 8.7
01_06_1526 + 38003071-38003247,38003338-38003690,38004489-38004987 27 8.7
>01_05_0422 -
22018579-22018698,22019548-22019644,22019744-22019908,
22022274-22022339,22022441-22022540,22022662-22023304
Length = 396
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 7 REQFTGYRDTNKDGFMDEGEVK---EWIAPPEFDHAEAEARHLVFEADGDADERLTRAEI 177
+E+F+ D + DGF+ E E++ + + E +A +A H + EAD D D RLT E+
Sbjct: 313 KERFSKL-DKDSDGFISEHELEPVLDKLHLSERYYARQQAAHAISEADKDHDGRLTLDEM 371
Query: 178 LDKYDLFVGSQATDFGEALVRHDEF 252
++ F GS E HDEF
Sbjct: 372 IENPYAFYGSVFLSDDEDYF-HDEF 395
>02_02_0103 +
6797830-6798433,6799412-6799480,6799573-6799664,
6799968-6800002,6800306-6800470,6800561-6800657,
6800915-6801031
Length = 392
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 7 REQFTGYRDTNKDGFMDEGEVKEWIA---PPEFDHAEAEARHLVFEADGDADERLTRAEI 177
R+ FT + D + DG + E+K I PPE +A+ +A +++ +AD + D +L+ E+
Sbjct: 310 RKSFT-HLDLDNDGLLSADELKPIIGNLHPPEHFYAKQQADYVITQADTNKDGQLSLQEM 368
Query: 178 LDKYDLFVGSQATD 219
++ +F + T+
Sbjct: 369 IENPYVFYSALFTE 382
>06_03_1213 - 28463774-28464286
Length = 170
Score = 35.5 bits (78), Expect = 0.025
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 10 EQFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILD 183
E F + D++ DG + E++ +A D E E R ++ AD D D +L+ E+LD
Sbjct: 34 EAFQAF-DSDNDGLVTAPELRGLLASLGLDKPEHEVRDMLARADADRDGKLSVEELLD 90
>01_01_0226 - 1930276-1930821
Length = 181
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 31 DTNKDGFMDEGEVKEWIAPPEFD-HAEAEARHLVFEADGDADERLTRAEI 177
DT++DGF+D GE + D EAE R D D D R+T AE+
Sbjct: 76 DTDRDGFVDLGEFAAFHGRGRGDAEHEAELRAAFDVYDVDGDGRITAAEL 125
>04_04_1618 +
34822644-34822915,34823008-34823369,34824721-34824796,
34824887-34824980,34825086-34825223
Length = 313
Score = 31.1 bits (67), Expect = 0.53
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 40 KDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILD-KYDLFVGSQAT 216
KDG + GE++ W+ D +A AR + D D D +T E L +D +G+
Sbjct: 117 KDGGVSCGELEAWLRRQAADRLDAVARRELKRHDKDGDGVVTLREYLAVDHDQHIGTDNC 176
Query: 217 DF 222
+F
Sbjct: 177 NF 178
>05_04_0127 - 18262499-18263104
Length = 201
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +1
Query: 31 DTNKDGFMDEGEVKEWIAPPEFDHAEAE--ARHL--VFEADGD 147
D++ DG++ GE APP D A AE RH VF+ADG+
Sbjct: 100 DSDGDGYISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDADGN 142
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 30.3 bits (65), Expect = 0.93
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 1 QEREQFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADE 156
+E ++F Y D N D DEGE E I E ++ + + E D D DE
Sbjct: 209 EEEDEFL-YEDENVDDDEDEGEEDEEIEEDEDENNDDDDEEEEMEEDEDLDE 259
>03_05_0917 +
28774068-28774128,28774293-28774392,28774413-28775056,
28775567-28775727,28776362-28776430
Length = 344
Score = 30.3 bits (65), Expect = 0.93
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 31 DTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEIL 180
D N DGF+ E+ E ++ +H EAE + ++ EA D + + E L
Sbjct: 264 DRNDDGFITSEELGELLSCLGLNHTEAELQAMIEEAAPDGNGAIDFHEFL 313
>09_04_0098 - 14580949-14581176,14581213-14581470
Length = 161
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 31 DTNKDGFMDEGEVKEWIAPPEF--DHAEAEARHLVFEADGDADERLTRAEIL 180
D N DGF+D GE+ +A F AE + ++ D D D R+ E L
Sbjct: 102 DRNGDGFIDAGELGSVLASLGFAAGAGHAECQRMIDAYDADKDGRVDFREFL 153
>06_03_0295 - 19235755-19235949,19236330-19236548,19237297-19237503
Length = 206
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 366 FKRGCFFSRFSQIIISGQCYRNISIPFPLSGVRARDVLELVVADERLAEVGRLGADEQV 190
F R C II++G C R +++ L R+ + LEL+ +E + +V +G D +
Sbjct: 86 FVRKCVMRE--NIIVTG-CVREVNVQSGLPATRSTERLELLDDNEHILKVKFIGGDHML 141
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 431 GPKLNHFEGGCFFCVKILNK 372
GPKL EGGC CV +++K
Sbjct: 43 GPKLGCGEGGCGACVVVVSK 62
>03_06_0252 -
32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 431 GPKLNHFEGGCFFCVKILNK 372
GPKL EGGC CV +++K
Sbjct: 44 GPKLGCGEGGCGACVVVVSK 63
>01_06_0644 +
30821811-30821855,30822707-30822976,30823079-30824383,
30824551-30824692,30824752-30825275
Length = 761
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 40 KDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILDKYD 192
+D D GE+KE A HA+ EA+H E D+ E +D+ D
Sbjct: 575 QDVLHDLGEIKENEAEQNIVHADQEAQHQEEEELHMVDDATMTLEPMDEED 625
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +1
Query: 28 RDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILDKYDLFVGS 207
RD+ G + G +AP E + A +R LV D D +E +++ + D+F G+
Sbjct: 132 RDSPDGGDLTIGHFDAGVAPQEGLRSRAISRQLVEHLD-DVEEE-EEEQVVSRLDIFEGA 189
Query: 208 QATDFGEALVRHDE 249
+ + L D+
Sbjct: 190 KGREARAFLPDEDD 203
>06_02_0139 +
12247051-12247155,12247250-12247327,12247412-12247519,
12247882-12247944,12248024-12248185,12248424-12248624,
12248663-12248725,12248915-12249244,12249870-12250034,
12250110-12251078
Length = 747
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 321 SGQCYRNISIPFPLSGVRARDVLELVVADERLAEVGRLGADEQVV 187
+G Y ++ P LSG +DV+ ++ LA+ G + E+ V
Sbjct: 6 NGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAV 50
>01_06_1526 + 38003071-38003247,38003338-38003690,38004489-38004987
Length = 342
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 344 EKKHPRLKRIYLEF*HKKNTPLQSDLILGQFKLRFIK*GLLVSNNSRPKLYVP 502
EKKHP KR+ + K PL S L F R + G VS + + ++ P
Sbjct: 238 EKKHPVFKRVGNDLVLKAEVPLVSALTGWSFSFRLLS-GKKVSCSFQDEIICP 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,932,734
Number of Sequences: 37544
Number of extensions: 203765
Number of successful extensions: 517
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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