Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E19
         (507 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64601-9|AAB04578.1|  314|Caenorhabditis elegans Hypothetical pr...    97   9e-21
AF228528-1|AAF34189.1|  314|Caenorhabditis elegans calumenin-lik...    97   9e-21
AF106590-2|AAC78237.2|  301|Caenorhabditis elegans Hypothetical ...    41   4e-04
Z72513-3|CAA96671.2|  127|Caenorhabditis elegans Hypothetical pr...    35   0.029
U29488-8|AAA68777.1|  320|Caenorhabditis elegans Hypothetical pr...    35   0.039

>U64601-9|AAB04578.1|  314|Caenorhabditis elegans Hypothetical
           protein M03F4.7a protein.
          Length = 314

 Score = 96.7 bits (230), Expect = 9e-21
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = +1

Query: 4   EREQFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILD 183
           ERE F  +RD + DG +++ E+++WI P  FDHAEAEARHLV  AD + D +L   EI+ 
Sbjct: 230 EREMFKEHRDKDGDGKLNQEEMRDWIMPVGFDHAEAEARHLVGIADDNKDGKLNLDEIVA 289

Query: 184 KYDLFVGSQATDFGEALVRHD 246
            YD FVGSQATD+GE L +HD
Sbjct: 290 HYDTFVGSQATDYGEQLQKHD 310


>AF228528-1|AAF34189.1|  314|Caenorhabditis elegans calumenin-like
           protein protein.
          Length = 314

 Score = 96.7 bits (230), Expect = 9e-21
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = +1

Query: 4   EREQFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILD 183
           ERE F  +RD + DG +++ E+++WI P  FDHAEAEARHLV  AD + D +L   EI+ 
Sbjct: 230 EREMFKEHRDKDGDGKLNQEEMRDWIMPVGFDHAEAEARHLVGIADDNKDGKLNLDEIVA 289

Query: 184 KYDLFVGSQATDFGEALVRHD 246
            YD FVGSQATD+GE L +HD
Sbjct: 290 HYDTFVGSQATDYGEQLQKHD 310


>AF106590-2|AAC78237.2|  301|Caenorhabditis elegans Hypothetical
           protein F08B6.3 protein.
          Length = 301

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = +1

Query: 4   EREQFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILD 183
           E E+F    D NKDG +   E+ +W+          EA  L+  +D D D +L+  EI+ 
Sbjct: 216 EVERFRTVYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDDDKDGQLSYEEIVK 275

Query: 184 KYDLFVGSQATDFGEAL---VRHDE 249
            + LF  ++A    + L     HDE
Sbjct: 276 HHALFAKTEAAQEADHLHPYYSHDE 300



 Score = 37.9 bits (84), Expect = 0.004
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 10  EQFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDAD 153
           E+F    DTN DGF+D+ E+  W++       + EA   + E D +AD
Sbjct: 51  EKFAKALDTNNDGFVDKSEILAWVSESYQKTVDREAVERISELDENAD 98


>Z72513-3|CAA96671.2|  127|Caenorhabditis elegans Hypothetical
           protein T04F3.4 protein.
          Length = 127

 Score = 35.1 bits (77), Expect = 0.029
 Identities = 27/80 (33%), Positives = 38/80 (47%)
 Frame = +1

Query: 1   QEREQFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEIL 180
           Q+R  +    D NKD F+D  E+ + +      H   ++ H V  +D    ERL  A +L
Sbjct: 52  QQRFHYFSMHDLNKDNFIDGIEILKALT---HTHDAHDSGHPVPVSDEAETERLVDA-VL 107

Query: 181 DKYDLFVGSQATDFGEALVR 240
           D  D F G    D+GE L R
Sbjct: 108 DDLD-FNGDGVIDYGEYLKR 126


>U29488-8|AAA68777.1|  320|Caenorhabditis elegans Hypothetical
           protein C56C10.9 protein.
          Length = 320

 Score = 34.7 bits (76), Expect = 0.039
 Identities = 22/79 (27%), Positives = 36/79 (45%)
 Frame = +1

Query: 13  QFTGYRDTNKDGFMDEGEVKEWIAPPEFDHAEAEARHLVFEADGDADERLTRAEILDKYD 192
           +F    D N DG     E+ +++ P  F  A  E   ++   D + DE+L+  E+L++  
Sbjct: 243 EFNEEIDENSDGKATFRELYDYVDPQNFRLASKEVNDIMMLTDANNDEKLSLEELLERDW 302

Query: 193 LFVGSQATDFGEALVRHDE 249
           L   S       +L  HDE
Sbjct: 303 LLARSSLLSARSSL--HDE 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,228,725
Number of Sequences: 27780
Number of extensions: 169928
Number of successful extensions: 381
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)