Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E18
         (454 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical...    28   2.8  
AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical...    27   6.4  
AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical...    27   6.4  
U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AL008868-1|CAA15515.2|  213|Caenorhabditis elegans Hypothetical ...    27   8.4  

>Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical
           protein T06E4.8 protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = +1

Query: 118 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLAP 261
           V A P P F+ P+  P     PI  GPAF     P   P     P+AP
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAPVGV-APVAP 156


>Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical
           protein T06E4.9 protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +1

Query: 118 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLAP 261
           V A P P F+ P+  P     P+  GPAF     P   P     P+AP
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAPVGV-APVAP 169


>AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical
           protein Y71G12B.8 protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 19/59 (32%), Positives = 23/59 (38%)
 Frame = +1

Query: 115 VVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLAPWWEVNVLIKD 291
           VV+A P        N PS N   I      V F  PN PPK+    +       VL+ D
Sbjct: 272 VVVATPGRLIDHLHNSPSFNLSNIE-----VFFKTPNIPPKKNSRKICKIPNFQVLVLD 325


>AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical
           protein W02D3.11b protein.
          Length = 362

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
 Frame = +1

Query: 130 PDPFFSQPSNGPSGNYEPIS--TGP--AFVDFNHPNYPPKRYDNPLAP 261
           P PF S P   P G Y+P S  T P     D+     P   Y    AP
Sbjct: 219 PPPFASAPQTAPRGAYDPYSQPTDPYRNATDYRRAAEPEDPYARSRAP 266


>AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical
           protein W02D3.11a protein.
          Length = 549

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
 Frame = +1

Query: 130 PDPFFSQPSNGPSGNYEPIS--TGP--AFVDFNHPNYPPKRYDNPLAP 261
           P PF S P   P G Y+P S  T P     D+     P   Y    AP
Sbjct: 219 PPPFASAPQTAPRGAYDPYSQPTDPYRNATDYRRAAEPEDPYARSRAP 266


>U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical
           protein F47E1.3 protein.
          Length = 594

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
 Frame = +1

Query: 127 NPDPFFSQP--SNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPL 255
           +P PF + P  SN         S  P F  +     PP R  +PL
Sbjct: 90  SPPPFMTSPATSNNSVSVARKTSAPPGFAQYEPDTAPPSRSTSPL 134


>AL008868-1|CAA15515.2|  213|Caenorhabditis elegans Hypothetical
           protein C53C7.3 protein.
          Length = 213

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 PAFVDFNHPNYPPKRYDNPLAPWWEVNVLIKD 291
           PAF D ++P++PP  Y+  L    EV V+ +D
Sbjct: 182 PAFFDHHYPHFPP--YELNLQDLQEVEVVPED 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,465,567
Number of Sequences: 27780
Number of extensions: 190979
Number of successful extensions: 515
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)