Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E14
         (558 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44)             182   2e-46
SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)                 116   2e-26
SB_45087| Best HMM Match : HEAT (HMM E-Value=1e-08)                    33   0.21 
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)                  33   0.21 
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)                  30   1.1  
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.9  
SB_22907| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.9  

>SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44)
          Length = 405

 Score =  182 bits (443), Expect = 2e-46
 Identities = 91/126 (72%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
 Frame = +2

Query: 98  RNLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLEC 277
           + LV D N HVKSALASVIMGL+P++G+ NTIE LLPLFL  LKDE PEVRLNIIS L+C
Sbjct: 240 KELVIDPNQHVKSALASVIMGLSPLLGKDNTIEHLLPLFLTMLKDEFPEVRLNIISNLDC 299

Query: 278 VNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCMS- 454
           VN+V+G+ QL QSLLPAIV LA DTKWRVRLAIIE+M LLAGQ+G +FFD+KL  LCMS 
Sbjct: 300 VNQVIGVHQLSQSLLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSW 359

Query: 455 VVD*SC 472
           +VD  C
Sbjct: 360 LVDHVC 365



 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 24/80 (30%), Positives = 37/80 (46%)
 Frame = +2

Query: 197 QLLPLFLIQLKDECPEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAI 376
           +L+PLF     DE   VRL  +     + +VL  +     L+P +   AYD  WRVR  +
Sbjct: 113 ELVPLFTNLSSDEQDSVRLLAVENCPQIAQVLPHEDKDSILMPTVKSAAYDKSWRVRYMV 172

Query: 377 IEHMALLAGQIGQEFFDKKL 436
            + +  L   +G E    +L
Sbjct: 173 ADKITELQKAVGPEITKTEL 192



 Score = 34.7 bits (76), Expect = 0.052
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
 Frame = +2

Query: 113 DANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRL----NIISYLECV 280
           D +  V+  +A  I  L   VG + T  +L+P F + LKD   EVR      +  + E +
Sbjct: 163 DKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVLLKDCEAEVRAAAAGKVKEFSESL 222

Query: 281 NEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQE 418
           +  +    L+ ++LP +  L  D    V+ A+   +  L+  +G++
Sbjct: 223 SSDIRESVLMTNILPCVKELVIDPNQHVKSALASVIMGLSPLLGKD 268



 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 456 WLIDHVYAIREAGTLNRLKV 515
           WL+DHV +IREA  +N  K+
Sbjct: 359 WLVDHVCSIREAAAINLKKL 378



 Score = 27.9 bits (59), Expect = 5.9
 Identities = 21/87 (24%), Positives = 37/87 (42%)
 Frame = +2

Query: 161 LNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*L 340
           +N ++G     + LLP  +   +D    VRL II Y+  +   LG+    + L    +  
Sbjct: 300 VNQVIGVHQLSQSLLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSW 359

Query: 341 AYDTKWRVRLAIIEHMALLAGQIGQEF 421
             D    +R A   ++  L  + G E+
Sbjct: 360 LVDHVCSIREAAAINLKKLVEKFGPEW 386


>SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)
          Length = 426

 Score =  116 bits (278), Expect = 2e-26
 Identities = 58/79 (73%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = +2

Query: 239 PEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQE 418
           PEVRLNIIS L+CVN+V+G+ QL QSLLPAIV LA DTKWRVRLAIIE+M LLAGQ+G +
Sbjct: 2   PEVRLNIISNLDCVNQVIGVHQLSQSLLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVD 61

Query: 419 FFDKKLTGLCMS-VVD*SC 472
           FFD+KL  LCMS +VD  C
Sbjct: 62  FFDEKLNTLCMSWLVDHVC 80



 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 456 WLIDHVYAIREAGTLNRLKV 515
           WL+DHV +IREA  +N  K+
Sbjct: 74  WLVDHVCSIREAAAINLKKL 93



 Score = 28.3 bits (60), Expect = 4.5
 Identities = 21/92 (22%), Positives = 40/92 (43%)
 Frame = +2

Query: 161 LNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*L 340
           +N ++G     + LLP  +   +D    VRL II Y+  +   LG+    + L    +  
Sbjct: 15  VNQVIGVHQLSQSLLPAIVELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSW 74

Query: 341 AYDTKWRVRLAIIEHMALLAGQIGQEFFDKKL 436
             D    +R A   ++  L  + G E+  +++
Sbjct: 75  LVDHVCSIREAAAINLKKLVEKFGPEWAQQQV 106


>SB_45087| Best HMM Match : HEAT (HMM E-Value=1e-08)
          Length = 149

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
 Frame = +2

Query: 191 IEQLLPLFLIQLKDECPEVRLNIISYL-ECVNEVLGIQQ-----LLQSLLPAIV*LAYDT 352
           +E+LLP  L  + D  P+VR   +  L +C++ V  I +       + +LP++  L  D 
Sbjct: 43  LERLLPYMLFLVNDPLPQVRAQGLKTLTQCLHLVRNIPRSDANIFPEYILPSLSWLTQDA 102

Query: 353 KWRVRLAIIEHMALLA 400
           +  VR+A  E +A LA
Sbjct: 103 EVIVRIAYAESIASLA 118


>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
          Length = 1803

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
 Frame = +2

Query: 191 IEQLLPLFLIQLKDECPEVRLNIISYL-ECVNEVLGIQQ-----LLQSLLPAIV*LAYDT 352
           +E+LLP  L  + D  P+VR   +  L +C++ V  I +       + +LP++  L  D 
Sbjct: 289 LERLLPYMLFLVNDPLPQVRAQGLKTLTQCLHLVRNIPRSDANIFPEYILPSLSWLTQDA 348

Query: 353 KWRVRLAIIEHMALLA 400
           +  VR+A  E +A LA
Sbjct: 349 EVIVRIAYAESIASLA 364


>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
          Length = 722

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 242 EVRLNIISYLECVNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEF 421
           EVR  +   LE +   LG +    S++P +V L  D +  VRL+ +E +  L   +    
Sbjct: 14  EVRACMCQELESIARALGTETTKTSVIPELVELTNDEETSVRLSGMETITNLLNLLDDVN 73

Query: 422 FDK 430
           FD+
Sbjct: 74  FDE 76


>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 381

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -2

Query: 455 RTCRDRSASYRRTPDRFGRRVRPYAR*SPSGPSTWYHRL 339
           R C  R   YRRT  RFG R  P      SG   +  ++
Sbjct: 122 RECTPRQRKYRRTAARFGERGFPTTWTEESGTEVFIGKI 160


>SB_22907| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 513

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 268 LGVCERSPRNTAIIAISATG 327
           +G+  RSP NT II ISA G
Sbjct: 432 IGISARSPLNTVIIRISARG 451


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,489,588
Number of Sequences: 59808
Number of extensions: 363351
Number of successful extensions: 854
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)