SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E14
         (558 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g25490.1 68414.m03165 serine/threonine protein phosphatase 2A...   149   1e-36
At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A...   149   2e-36
At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A...   148   3e-36
At5g44010.1 68418.m05386 expressed protein                             29   2.1  
At5g07140.1 68418.m00814 protein kinase family protein contains ...    28   4.9  
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea...    27   8.5  

>At1g25490.1 68414.m03165 serine/threonine protein phosphatase 2A
           (PP2A) regulatory subunit A (RCN1) identical to
           phosphoprotein phosphatase 2A, regulatory subunit A
           GI:1262171 from [Arabidopsis thaliana]
          Length = 588

 Score =  149 bits (361), Expect = 1e-36
 Identities = 76/118 (64%), Positives = 92/118 (77%)
 Frame = +2

Query: 98  RNLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLEC 277
           + L  D++ HV+SALASVIMG+ PI+G+ +TIE LLP+FL  LKDE P+VRLNIIS L+ 
Sbjct: 325 KELSSDSSQHVRSALASVIMGMAPILGKDSTIEHLLPIFLSLLKDEFPDVRLNIISKLDQ 384

Query: 278 VNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCM 451
           VN+V+GI  L QSLLPAIV LA D  WRVRLAIIE++ LLA Q+G  FFD KL  LCM
Sbjct: 385 VNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYVPLLASQLGIGFFDDKLGALCM 442



 Score = 37.9 bits (84), Expect = 0.005
 Identities = 25/97 (25%), Positives = 43/97 (44%)
 Frame = +2

Query: 128 VKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVNEVLGIQQL 307
           V+ A AS +      V     I +++ +F    KD+   VRL  +     + ++L  Q  
Sbjct: 179 VRRAAASNLGKFATTVESTFLIAEIMTMFDDLTKDDQDSVRLLAVEGCAALGKLLEPQDC 238

Query: 308 LQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQE 418
           +  +LP IV  + D  WRVR  +   +  L   +G +
Sbjct: 239 VARILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPD 275



 Score = 36.3 bits (80), Expect = 0.014
 Identities = 28/120 (23%), Positives = 57/120 (47%)
 Frame = +2

Query: 101 NLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECV 280
           N   D +  V+  +A+ +  L   VG   T   L+P ++  L+D   EVR+     +   
Sbjct: 248 NFSQDKSWRVRYMVANQLYELCEAVGPDCTRTDLVPAYVRLLRDNEAEVRIAAAGKVTKF 307

Query: 281 NEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCMSVV 460
             +L  +  +Q +LP +  L+ D+   VR A+   +  +A  +G++   + L  + +S++
Sbjct: 308 CRLLNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDSTIEHLLPIFLSLL 367



 Score = 31.9 bits (69), Expect = 0.30
 Identities = 27/111 (24%), Positives = 46/111 (41%)
 Frame = +2

Query: 104 LVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVN 283
           L+ D    V+ A A  +     ++  +  I+ +LP       D    VR  + S +  + 
Sbjct: 288 LLRDNEAEVRIAAAGKVTKFCRLLNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMA 347

Query: 284 EVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKL 436
            +LG    ++ LLP  + L  D    VRL II  +  +   IG +   + L
Sbjct: 348 PILGKDSTIEHLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSL 398



 Score = 29.5 bits (63), Expect = 1.6
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +2

Query: 194 EQLLPLFLI--QLKDECPEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*LAYDTKWRVR 367
           E L P+ ++  +LK++  ++RLN I  L  +   LG ++  + L+P +   + D    V 
Sbjct: 6   EPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDDD-EVL 64

Query: 368 LAIIEHMALLAGQIGQ-EFFDKKLTGL-CMSVVD*SCVR 478
           LA+ E + +    +G  EF    L  L  +  V+ +CVR
Sbjct: 65  LAMAEELGVFIPFVGGIEFAHVLLPPLESLCTVEETCVR 103



 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/91 (24%), Positives = 41/91 (45%)
 Frame = +2

Query: 101 NLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECV 280
           +L  D    V+         L  ++  Q+ + ++LP+ +   +D+   VR  + + L  +
Sbjct: 209 DLTKDDQDSVRLLAVEGCAALGKLLEPQDCVARILPVIVNFSQDKSWRVRYMVANQLYEL 268

Query: 281 NEVLGIQQLLQSLLPAIV*LAYDTKWRVRLA 373
            E +G       L+PA V L  D +  VR+A
Sbjct: 269 CEAVGPDCTRTDLVPAYVRLLRDNEAEVRIA 299


>At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A
           (PP2A) 65 kDa regulatory subunit, putative similar to
           protein phosphatase 2A 65 kDa regulatory subunit
           GI:683502 from [Arabidopsis thaliana]
          Length = 587

 Score =  149 bits (360), Expect = 2e-36
 Identities = 75/118 (63%), Positives = 92/118 (77%)
 Frame = +2

Query: 98  RNLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLEC 277
           + L  D++ HV+SALASVIMG+ P++G+  TIE LLP+FL  LKDE P+VRLNIIS L+ 
Sbjct: 325 KELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLDQ 384

Query: 278 VNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCM 451
           VN+V+GI  L QSLLPAIV LA D  WRVRLAIIE++ LLA Q+G  FFD+KL  LCM
Sbjct: 385 VNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDEKLGALCM 442



 Score = 37.5 bits (83), Expect = 0.006
 Identities = 30/111 (27%), Positives = 47/111 (42%)
 Frame = +2

Query: 104 LVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVN 283
           L+CD    V+ A A  +     I+  +  I+ +LP       D    VR  + S +  + 
Sbjct: 288 LLCDNEAEVRIAAAGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMA 347

Query: 284 EVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKL 436
            VLG    ++ LLP  + L  D    VRL II  +  +   IG +   + L
Sbjct: 348 PVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSL 398



 Score = 35.9 bits (79), Expect = 0.018
 Identities = 28/120 (23%), Positives = 56/120 (46%)
 Frame = +2

Query: 101 NLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECV 280
           N   D +  V+  +A+ +  L   VG + T   L+P +   L D   EVR+     +   
Sbjct: 248 NFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYARLLCDNEAEVRIAAAGKVTKF 307

Query: 281 NEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCMSVV 460
             +L  +  +Q +LP +  L+ D+   VR A+   +  +A  +G++   + L  + +S++
Sbjct: 308 CRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLLPIFLSLL 367



 Score = 35.1 bits (77), Expect = 0.032
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = +2

Query: 200 LLPLFLIQLKDECPEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAII 379
           ++ +F    +D+   VRL  +     + ++L  Q  +  +LP IV  + D  WRVR  + 
Sbjct: 203 IMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVA 262

Query: 380 EHMALLAGQIGQE 418
             +  L   +G E
Sbjct: 263 NQLYELCEAVGPE 275



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 20/101 (19%), Positives = 45/101 (44%)
 Frame = +2

Query: 113 DANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVNEVL 292
           D  H ++ A A+ +  L    G +  ++ ++P  L  + +     R+ I+  +  +  V+
Sbjct: 447 DKVHSIREAAANNLKRLAEEFGPEWAMQHIVPQVLEMINNPHYLYRMTILRAVSLLAPVM 506

Query: 293 GIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQ 415
           G +     LLPA++  + D    ++  + + M  L   + Q
Sbjct: 507 GSEITCSKLLPAVITASKDRVPNIKFNVAKMMQSLIPIVDQ 547



 Score = 28.7 bits (61), Expect = 2.8
 Identities = 21/91 (23%), Positives = 40/91 (43%)
 Frame = +2

Query: 101 NLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECV 280
           +L  D    V+         L  ++  Q+ +  +LP+ +   +D+   VR  + + L  +
Sbjct: 209 DLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYEL 268

Query: 281 NEVLGIQQLLQSLLPAIV*LAYDTKWRVRLA 373
            E +G +     L+PA   L  D +  VR+A
Sbjct: 269 CEAVGPEPTRTDLVPAYARLLCDNEAEVRIA 299


>At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A
           (PP2A) 65 KDa regulatory subunit A identical to protein
           phosphatase 2A 65 kDa regulatory subunit (pDF1)
           GI:683502 from [Arabidopsis thaliana]
          Length = 587

 Score =  148 bits (358), Expect = 3e-36
 Identities = 75/118 (63%), Positives = 91/118 (77%)
 Frame = +2

Query: 98  RNLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLEC 277
           + L  D++ HV+SALASVIMG+ P++G+  TIE LLP+FL  LKDE P+VRLNIIS L+ 
Sbjct: 325 KELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLDQ 384

Query: 278 VNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCM 451
           VN+V+GI  L QSLLPAIV LA D  WRVRLAIIE++ LLA Q+G  FFD KL  LCM
Sbjct: 385 VNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCM 442



 Score = 39.1 bits (87), Expect = 0.002
 Identities = 28/120 (23%), Positives = 59/120 (49%)
 Frame = +2

Query: 101 NLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECV 280
           N   D +  V+  +A+ +  L   VG + T  +L+P ++  L+D   EVR+     +   
Sbjct: 248 NFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKF 307

Query: 281 NEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCMSVV 460
             +L  +  +Q +LP +  L+ D+   VR A+   +  +A  +G++   + L  + +S++
Sbjct: 308 CRILNPEIAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLLPIFLSLL 367



 Score = 37.1 bits (82), Expect = 0.008
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +2

Query: 200 LLPLFLIQLKDECPEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*LAYDTKWRVRLAII 379
           ++ +F    +D+   VRL  +     + ++L  Q  +Q +LP IV  + D  WRVR  + 
Sbjct: 203 VMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVA 262

Query: 380 EHMALLAGQIGQE 418
             +  L   +G E
Sbjct: 263 NQLYELCEAVGPE 275



 Score = 32.7 bits (71), Expect = 0.17
 Identities = 29/111 (26%), Positives = 46/111 (41%)
 Frame = +2

Query: 104 LVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVN 283
           L+ D    V+ A A  +     I+  +  I+ +LP       D    VR  + S +  + 
Sbjct: 288 LLRDNEAEVRIAAAGKVTKFCRILNPEIAIQHILPCVKELSSDSSQHVRSALASVIMGMA 347

Query: 284 EVLGIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKL 436
            VLG    ++ LLP  + L  D    VRL II  +  +   IG +   + L
Sbjct: 348 PVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSL 398



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 22/91 (24%), Positives = 42/91 (46%)
 Frame = +2

Query: 101 NLVCDANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECV 280
           +L  D    V+         L  ++  Q+ ++ +LP+ +   +D+   VR  + + L  +
Sbjct: 209 DLTQDDQDSVRLLAVEGCAALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVANQLYEL 268

Query: 281 NEVLGIQQLLQSLLPAIV*LAYDTKWRVRLA 373
            E +G +     L+PA V L  D +  VR+A
Sbjct: 269 CEAVGPEPTRTELVPAYVRLLRDNEAEVRIA 299



 Score = 30.3 bits (65), Expect = 0.91
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +2

Query: 194 EQLLPLFLI--QLKDECPEVRLNIISYLECVNEVLGIQQLLQSLLPAIV*LAYDTKWRVR 367
           E L P+ ++  +LK++  ++RLN I  L  +   LG ++  + L+P +     D    V 
Sbjct: 6   EPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLS-ENNDDDDEVL 64

Query: 368 LAIIEHMALLAGQI-GQEFFDKKLTGL-CMSVVD*SCVR 478
           LA+ E + +    + G E+    L  L  +S V+ +CVR
Sbjct: 65  LAMAEELGVFIPYVGGVEYAHVLLPPLETLSTVEETCVR 103



 Score = 27.9 bits (59), Expect = 4.9
 Identities = 19/108 (17%), Positives = 47/108 (43%)
 Frame = +2

Query: 113 DANHHVKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECVNEVL 292
           D  H ++ A A+ +  L    G +  ++ ++P  L  + +     R+ I+  +  +  V+
Sbjct: 447 DKVHSIRDAAANNLKRLAEEFGPEWAMQHIVPQVLEMVNNPHYLYRMTILRAVSLLAPVM 506

Query: 293 GIQQLLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKL 436
           G +     LLP ++  + D    ++  + + +  L   + Q   +K +
Sbjct: 507 GSEITCSKLLPVVMTASKDRVPNIKFNVAKVLQSLIPIVDQSVVEKTI 554


>At5g44010.1 68418.m05386 expressed protein 
          Length = 357

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = -1

Query: 447 QRPVSFLSKNS*PIWPASKAICSMIAKRTLHLVS*AS 337
           Q+P+  L  N   IW  SKAI   ++KRTL LVS AS
Sbjct: 147 QQPIELLRWN---IWQ-SKAISYFLSKRTLRLVSGAS 179


>At5g07140.1 68418.m00814 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 583

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +2

Query: 128 VKSALASVIMGLNPIVGRQNTIEQLLPLFLIQLKDECPEVRLNIISYLECV 280
           V++A+     GL P + ++    Q+L   +I+  + CP  RLN  S + C+
Sbjct: 529 VQAAVGIAACGLRPDIPKE--CPQVLKYLMIKCWNTCPSTRLN-FSQIHCI 576


>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
            family protein similar to WD-repeat protein mip1
            (SP:P87141) [Schizosaccharomyces pombe]
          Length = 1354

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 305  LLQSLLPAIV*LAYDTKWRVRLAIIEHMALLAGQIGQEFFDKKLTGLCM 451
            LL    P +V  A D   R+R+   E   LL G    +F DK ++ LC+
Sbjct: 1026 LLHPFSPIVV--AADENERIRVWNYEEATLLNGFDNNDFPDKGISNLCL 1072


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,886,503
Number of Sequences: 28952
Number of extensions: 232546
Number of successful extensions: 562
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -