Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E13
(420 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 28 0.042
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 27 0.056
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 1.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 4.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.4
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 6.4
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 6.4
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 6.4
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 27.9 bits (59), Expect = 0.042
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 89 KANSNNRHHKANSNNSLHKANSNN 160
+ ++NNR H A SN+S++ AN+NN
Sbjct: 1002 ETHTNNRTHSATSNSSVN-ANTNN 1024
Score = 23.8 bits (49), Expect = 0.69
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNN 133
++NNR H A SN+ + AN+NN
Sbjct: 1004 HTNNRTHSATSNSSVN-ANTNN 1024
Score = 21.0 bits (42), Expect = 4.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 116 KANSNNSLHKANSNNSLH 169
+ ++NN H A SN+S++
Sbjct: 1002 ETHTNNRTHSATSNSSVN 1019
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 27.5 bits (58), Expect = 0.056
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 71 SNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
SNNR H N NN ++ NN N+ +S
Sbjct: 372 SNNRWHNNNGNNSNNHWRKNNPNDNRNNTSS 402
Score = 25.8 bits (54), Expect = 0.17
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 92 ANSNNRHHKANSNNSLHKANSNN 160
+ SNNR H N NNS + NN
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNN 392
Score = 22.2 bits (45), Expect = 2.1
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKAN----SNNSLHKANSNNS 163
N N K +S+ + + N SNN H N NNS
Sbjct: 349 NRGNGFPKRSSDEQQWRNNQPSTSNNRWHNNNGNNS 384
Score = 21.0 bits (42), Expect = 4.9
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 59 HKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
H N NN ++ NN + N NN+ +A S
Sbjct: 377 HNNNGNNSNNHWRKNNPND--NRNNTSSRAQGETS 409
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 23.0 bits (47), Expect = 1.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 264 PNTITTGSSKSIPTATTSMAIPTTVTSNSIPGTA 365
P +I G++ +I T + VTS IPG A
Sbjct: 47 PRSIHGGTTVTITATQTGESEMMVVTSGVIPGVA 80
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.0 bits (42), Expect = 4.9
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +2
Query: 65 FNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLH 169
F + +K NS + + +NN+ N N+ H
Sbjct: 291 FQNRRMKNKKNSQRQAAQQQNNNNAATNNQNHHHH 325
Score = 21.0 bits (42), Expect = 4.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 74 NNRHHKANSNNRHHKA 121
NN + N+ N HH A
Sbjct: 311 NNNNAATNNQNHHHHA 326
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 20.6 bits (41), Expect = 6.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 270 TITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACST 377
T TT S+ + PT T S I S +CS+
Sbjct: 1185 TKTTTSTTTRPTTTVSQLIDDKCDSGQYYPHESCSS 1220
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 20.6 bits (41), Expect = 6.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 71 SNNRHHKANSNNRHHKANSNNSLHKANSN 157
+NN A +NN + NSN + +S+
Sbjct: 127 NNNNTPSATNNNTNFNNNSNGASSVGSSS 155
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 20.6 bits (41), Expect = 6.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 71 SNNRHHKANSNNRHHKANSNNSLHKANSN 157
+NN A +NN + NSN + +S+
Sbjct: 75 NNNNTPSATNNNTNFNNNSNGASSVGSSS 103
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 20.6 bits (41), Expect = 6.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 71 SNNRHHKANSNNRHHKANSNNSLHKANSN 157
+NN A +NN + NSN + +S+
Sbjct: 258 NNNNTPSATNNNTNFNNNSNGASSVGSSS 286
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.275 0.102 0.280
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,622
Number of Sequences: 336
Number of extensions: 434
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9279512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 18 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (19.2 bits)
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