Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E13
(420 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 32 0.68
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 32 0.68
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 31 2.1
AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein. 30 2.7
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 29 4.8
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 29 6.3
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 29 6.3
AC005254-1|AAC25581.1| 315|Homo sapiens PGCN_HUMAN, PARTIAL CDS... 29 6.3
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 29 6.3
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 8.4
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 29 8.4
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 8.4
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 8.4
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 32.3 bits (70), Expect = 0.68
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 270 TITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTT 380
T T ++ SIPT TT + T T+ S+P T + TT
Sbjct: 163 TTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTT 199
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 264 PNTITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTTI 383
P TT ++PT TT T T+ ++P T +TT+
Sbjct: 127 PKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTV 166
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 32.3 bits (70), Expect = 0.68
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 270 TITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTT 380
T T ++ SIPT TT + T T+ S+P T + TT
Sbjct: 163 TTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTT 199
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 264 PNTITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTTI 383
P TT ++PT TT T T+ ++P T +TT+
Sbjct: 127 PKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTV 166
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 270 TITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTT 380
T T ++ SIPT TT T T+ S+P T + TT
Sbjct: 158 TTTVPTTMSIPTTTTVPTTMTVSTTTSVPTTTSIPTT 194
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 264 PNTITTGSSKSIPTATTSMAIPTTV--TSNSIPGTAACSTTI 383
P T +S ++PT TT +PTT T+ SIP T TT+
Sbjct: 139 PTVTTVRTSTTVPTTTT---VPTTTVPTTMSIPTTTTVPTTM 177
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 264 PNTITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTTIAKARYP 401
P T+T ++ S+PT T+ IPTT S+P T ST + P
Sbjct: 174 PTTMTVSTTTSVPTTTS---IPTTT---SVPVTTTVSTFVPPMPLP 213
>AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.
Length = 1450
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 53 KPHKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
K H+ +H K++ + R HKA++ KA S K
Sbjct: 619 KSHRHKKKKKHKKSSKHKRKHKADTEEKSSKAESGEKSKK 658
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 29.5 bits (63), Expect = 4.8
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = +2
Query: 53 KPHKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
+ H+ ++ HH+ + + HHK+ HK + K
Sbjct: 1276 RSHRMRGHHHHHQHHHQHHHHKSRKERRKHKKHPTEDWEK 1315
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 285 SSKSIPTATTSMAIPTTVTSNSIPGTAACSTTI 383
+S +IPT T S +P VTS A STTI
Sbjct: 10919 ASSAIPTPTVSPGVPGVVTSLVTSSRAVTSTTI 10951
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 285 SSKSIPTATTSMAIPTTVTSNSIPGTAACSTTI 383
+S +IPT T S +P VTS A STTI
Sbjct: 2623 ASSAIPTPTVSPGVPGVVTSLVTSSRAVTSTTI 2655
>AC005254-1|AAC25581.1| 315|Homo sapiens PGCN_HUMAN, PARTIAL CDS
protein.
Length = 315
Score = 29.1 bits (62), Expect = 6.3
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = +2
Query: 53 KPHKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
+ H+ ++ HH+ + + HHK+ HK + K
Sbjct: 270 RSHRMRRHHHHHQHHHQHHHHKSRKERRKHKKHPTEDWEK 309
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 29.1 bits (62), Expect = 6.3
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = +2
Query: 53 KPHKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
+ H+ ++ HH+ + + HHK+ HK + K
Sbjct: 1290 RSHRMRRHHHHHQHHHQHHHHKSRKERRKHKKHPTEDWEK 1329
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +3
Query: 258 SKPNTITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTTIAKARYP 401
S P T T I T TT +TVT +SIPGT T + P
Sbjct: 2496 SSPGTART-PPVWISTTTTPTTSGSTVTPSSIPGTTHTPTVLTTTTQP 2542
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 285 SSKSIPTATTSMAIPTTVTSNSIPGT 362
S+ + PT TT +TVT +SIPGT
Sbjct: 3236 STTTTPTTTTPTTSGSTVTPSSIPGT 3261
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 285 SSKSIPTATTSMAIPTTVTSNSIPGT 362
S+ + PT TT +TVT +SIPGT
Sbjct: 451 STTTTPTTTTPTTSGSTVTPSSIPGT 476
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 258 SKPNTITTGSSKSIPTATTSMAIPTTVTS 344
++P+T+TT ++ ++PT TS TT T+
Sbjct: 635 TRPSTLTTFTTITLPTTPTSFTTTTTTTT 663
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 258 SKPNTITTGSSKSIPTATTSMAIPTTVTS 344
++P+T+TT ++ ++PT TS TT T+
Sbjct: 1260 TRPSTLTTFTTITLPTTPTSFTTTTTTTT 1288
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.275 0.102 0.280
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,995,913
Number of Sequences: 237096
Number of extensions: 215957
Number of successful extensions: 445
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 18 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 47 (21.9 bits)
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