Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E13
(420 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g17970.1 68417.m02675 expressed protein contains Pfam profile... 33 0.078
At3g18810.1 68416.m02389 protein kinase family protein contains ... 31 0.32
At2g02450.2 68415.m00185 no apical meristem (NAM) family protein... 31 0.32
At2g02450.1 68415.m00184 no apical meristem (NAM) family protein... 31 0.32
At5g10510.1 68418.m01217 ovule development protein, putative sim... 30 0.55
At4g20190.1 68417.m02952 hypothetical protein 30 0.55
At3g22380.1 68416.m02825 expressed protein 30 0.55
At1g18265.1 68414.m02278 expressed protein 30 0.55
At2g32730.1 68415.m04005 26S proteasome regulatory subunit, puta... 29 0.97
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 2.2
At2g44340.1 68415.m05515 VQ motif-containing protein contains PF... 28 2.2
At2g35940.2 68415.m04412 homeodomain-containing protein contains... 28 2.2
At2g35940.1 68415.m04411 homeodomain-containing protein contains... 28 2.2
At4g29230.1 68417.m04181 no apical meristem (NAM) family protein... 27 3.9
At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (D... 27 5.2
At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / he... 27 5.2
At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A... 27 5.2
At1g79250.1 68414.m09239 protein kinase, putative similar to vir... 27 5.2
At1g21610.2 68414.m02703 wound-responsive family protein similar... 27 5.2
At1g21610.1 68414.m02702 wound-responsive family protein similar... 27 5.2
At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /... 27 6.8
At5g02460.1 68418.m00173 Dof-type zinc finger domain-containing ... 27 6.8
At3g14180.1 68416.m01792 expressed protein similar to 6b-interac... 27 6.8
At2g43970.2 68415.m05468 La domain-containing protein contains P... 27 6.8
At2g43970.1 68415.m05467 La domain-containing protein contains P... 27 6.8
At5g42050.1 68418.m05119 expressed protein similar to gda-1 [Pis... 26 9.0
At2g15860.1 68415.m01818 expressed protein and genefinder 26 9.0
>At4g17970.1 68417.m02675 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 560
Score = 33.1 bits (72), Expect = 0.078
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 74 NNRHHKAN-SNNRHHKANSNNSLHKANSNNSL 166
NN+H + SNN+HH+ NS+NS N + SL
Sbjct: 390 NNKHQNGSISNNKHHQRNSSNSGKDLNGDVSL 421
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 71 SNNRHHKANSNNRHHKANSNNSLHKANS 154
SNN+HH+ NS+N N + SL +
Sbjct: 399 SNNKHHQRNSSNSGKDLNGDVSLQNTET 426
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNN 160
N NN + N+NN ++ ++NN +K N+NN
Sbjct: 77 NGNNNNDNNNNNNGNNNNDNNNGNNKDNNNN 107
Score = 30.3 bits (65), Expect = 0.55
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNN 160
N NN ++ N+NN ++ N+ ++ + N+NN
Sbjct: 82 NDNNNNNNGNNNNDNNNGNNKDNNNNGNNNN 112
Score = 29.5 bits (63), Expect = 0.97
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
N+NN ++ ++NN ++K N+NN + +NN+
Sbjct: 86 NNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNN 117
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
N+N+ ++ N NN + N NN + N NN+
Sbjct: 80 NNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNN 111
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
N+NN + N NN + ++NN+ + N NN+
Sbjct: 85 NNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNN 116
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
++NN ++K N+NN ++ +NN+ + N NN+
Sbjct: 95 DNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNN 126
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 59 HKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
+K N+NN ++ +NN + N NN+ N NN+
Sbjct: 101 NKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNN 135
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
N+ N ++ N+NN + N NN+ + ++NN+
Sbjct: 76 NNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNN 107
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 56 PHKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
P NN + N NN + N+NN + ++NN +K
Sbjct: 64 PPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNK 102
Score = 26.2 bits (55), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
N N + N NN ++ N+NN + N+ ++
Sbjct: 73 NDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDN 104
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNN 160
N NN+ + N NN + N+ N + N+NN
Sbjct: 98 NGNNKDNNNNGNNNNGNNNNGND-NNGNNNN 127
>At2g02450.2 68415.m00185 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain
Length = 414
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 59 HKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLH 169
H NS+ A +HH ++SN+S + N+NN+++
Sbjct: 216 HNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNIN 252
>At2g02450.1 68415.m00184 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain
Length = 379
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 59 HKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLH 169
H NS+ A +HH ++SN+S + N+NN+++
Sbjct: 216 HNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNIN 252
>At5g10510.1 68418.m01217 ovule development protein, putative
similar to ovule development protein aintegumenta
(GI:1209099) [Arabidopsis thaliana]
Length = 566
Score = 30.3 bits (65), Expect = 0.55
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
N NN + N N+ H++ N+N N+NN K
Sbjct: 187 NVNNNTNHRNDNDNHYRGNNNGERINNNNNNDNEK 221
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANS 154
N N+ H++ N+N N+NN K +S
Sbjct: 196 NDNDNHYRGNNNGERINNNNNNDNEKTDS 224
>At4g20190.1 68417.m02952 hypothetical protein
Length = 389
Score = 30.3 bits (65), Expect = 0.55
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 71 SNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
S N HH N + +NS + HK++ NNS
Sbjct: 150 SRNAHHNQNHHRGFSSSNSKSLSHKSSGNNS 180
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
NS + HK++ NN +N +++NSN + K
Sbjct: 167 NSKSLSHKSSGNNSFFSKTESNKSNRSNSNTANSK 201
Score = 26.6 bits (56), Expect = 6.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +2
Query: 53 KPHKFNSNNRHHK----ANSNNRHHKANSNNS-LHKANSNNS 163
K + N HH+ +NS + HK++ NNS K SN S
Sbjct: 149 KSRNAHHNQNHHRGFSSSNSKSLSHKSSGNNSFFSKTESNKS 190
>At3g22380.1 68416.m02825 expressed protein
Length = 1550
Score = 30.3 bits (65), Expect = 0.55
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSN 157
+S + HH S N HH +S+N+ H+ +N
Sbjct: 144 SSLSNHHNGGSGNLHHHHHSHNNNHQRKNN 173
>At1g18265.1 68414.m02278 expressed protein
Length = 280
Score = 30.3 bits (65), Expect = 0.55
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 65 FNSNNRHHKANSNNRHHKANSNNSLHKANSNNSL 166
FNS NR HK +NN ++ N+N + K++ + L
Sbjct: 78 FNSFNREHKDCNNNNNNNNNNNGFISKSHLADGL 111
>At2g32730.1 68415.m04005 26S proteasome regulatory subunit,
putative contains similarity to 26S proteasome
regulatory subunit S1 SP:O88761, GI:3288594 from [Rattus
norvegicus]
Length = 1004
Score = 29.5 bits (63), Expect = 0.97
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 252 ARSKPNTITTGSSKSIPTATTSMAIPTTVTSNSIPGTA 365
+ +KP+ ++PTA T++ +PT V S S+ A
Sbjct: 814 SHAKPSLFEYPKPTTVPTANTAVKLPTAVLSTSVKAKA 851
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 270 TITTGSSKSIPTATTSMAIPTTVTSNSIPGTAACSTTIAKARYPPIVS 413
T T S + P + A P TVT+ ++ T +T YPPI S
Sbjct: 1270 TTTPESVTTAPPEPITTAPPETVTTTAVKPTENAATERRVTNYPPIRS 1317
>At2g44340.1 68415.m05515 VQ motif-containing protein contains
PF05678: VQ motif
Length = 188
Score = 28.3 bits (60), Expect = 2.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 65 FNSNNRHHKANSNNRHHKANSNNSLHKAN 151
FN+NN ++ N+NN ++ N + H ++
Sbjct: 160 FNNNNNNNNNNNNNNNNNTNFDTKAHNSS 188
>At2g35940.2 68415.m04412 homeodomain-containing protein contains
'Homeobox' domain signature, Prosite:PS00027
Length = 680
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNS 136
N+NN + +N+NN + N+NNS
Sbjct: 42 NNNNNSNNSNNNNTNTNTNNNNS 64
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 92 ANSNNRHHKANSNNSLHKANSNNS 163
+N+NN + +N+NN+ N+NNS
Sbjct: 41 SNNNNNSNNSNNNNTNTNTNNNNS 64
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNS 136
+SNN ++ NSNN + N+NN+
Sbjct: 40 DSNNNNNSNNSNNNNTNTNTNNN 62
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 95 NSNNRHHKANSNNSLHKANSNNS 163
+SNN ++ NSNN+ N+NN+
Sbjct: 40 DSNNNNNSNNSNNNNTNTNTNNN 62
>At2g35940.1 68415.m04411 homeodomain-containing protein contains
'Homeobox' domain signature, Prosite:PS00027
Length = 680
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNS 136
N+NN + +N+NN + N+NNS
Sbjct: 42 NNNNNSNNSNNNNTNTNTNNNNS 64
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 92 ANSNNRHHKANSNNSLHKANSNNS 163
+N+NN + +N+NN+ N+NNS
Sbjct: 41 SNNNNNSNNSNNNNTNTNTNNNNS 64
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNS 136
+SNN ++ NSNN + N+NN+
Sbjct: 40 DSNNNNNSNNSNNNNTNTNTNNN 62
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 95 NSNNRHHKANSNNSLHKANSNNS 163
+SNN ++ NSNN+ N+NN+
Sbjct: 40 DSNNNNNSNNSNNNNTNTNTNNN 62
>At4g29230.1 68417.m04181 no apical meristem (NAM) family protein
similar to NAM family proteins GP|12751304|,
GP|6223650|, GP|9758909 - Arabidopsis
thaliana,PIR2:T04621
Length = 498
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 59 HKFNSNNRHHKANSNNRHHKANSNNSLHKANSNNSLH 169
H+ +S+ HH A+ ++ HH H N + H
Sbjct: 347 HQPSSSTSHHMAHDHHHHHHQQQQQRHHAFNISQPTH 383
>At5g03415.1 68418.m00294 DPB-1 transcription factor, putative (DPB)
similar to Swiss-Prot:Q14186 transcription factor DP-1
[Homo sapiens]; contains Pfam profile PF02319:
Transcription factor E2F/dimerisation partner (TDP)
Length = 385
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANS 127
NSN+ HH++N+NN + S
Sbjct: 7 NSNHNHHESNNNNNNPSTRS 26
Score = 26.6 bits (56), Expect = 6.8
Identities = 8/15 (53%), Positives = 14/15 (93%)
Frame = +2
Query: 92 ANSNNRHHKANSNNS 136
+NSN+ HH++N+NN+
Sbjct: 6 SNSNHNHHESNNNNN 20
>At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / heat
shock transcription factor 1 (HSTF1) identical to heat
shock transcription factor 1 (HSF1) SP:P41151 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00447
HSF-type DNA-binding domain
Length = 495
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLH 142
N+NN ++ N+NN ++ N+ N H
Sbjct: 454 NNNNNNNNNNNNNNNNNNNNTNGRH 478
>At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 497
Score = 27.1 bits (57), Expect = 5.2
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +2
Query: 62 KFNSNNRHHKANSNNRHHKANS 127
KFN +++HH+ N+NN ++ + +
Sbjct: 12 KFNKSDQHHQDNNNNNNNTSTN 33
>At1g79250.1 68414.m09239 protein kinase, putative similar to viroid
symptom modulation protein/dual-specificity protein
kinase [Lycopersicon esculentum] gi|7672777|gb|AAF66637
Length = 555
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNS 163
N N + + NSNN + ++ +NS+ +SN S
Sbjct: 87 NLNTKPNNNNSNNNSNMSSRSNSIESTSSNPS 118
>At1g21610.2 68414.m02703 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 683
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 68 NSNNRHHKANSNNRH--HKANSNNSLHKANSNNSLHK 172
+S+ +H++ ++ H + S+++LH+ SN SLH+
Sbjct: 242 HSDRANHQSRNDTSHKSRETGSSSALHQKYSNKSLHQ 278
>At1g21610.1 68414.m02702 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 684
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 68 NSNNRHHKANSNNRH--HKANSNNSLHKANSNNSLHK 172
+S+ +H++ ++ H + S+++LH+ SN SLH+
Sbjct: 242 HSDRANHQSRNDTSHKSRETGSSSALHQKYSNKSLHQ 278
>At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 447
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 53 KPHKFNSNNRHHKANSNNRHHKANSNNSLHK 145
K + SN RHH+ + ++ HH +N +S K
Sbjct: 3 KLRSYYSNVRHHQNHHHHHHHHSNIVSSERK 33
>At5g02460.1 68418.m00173 Dof-type zinc finger domain-containing
protein zinc finger protein OBP3, Arabidopsis thaliana,
EMBL:AF155818
Length = 399
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNSL 166
NS ++ +++ HH+A +NN + +S++SL
Sbjct: 165 NSKSQDSATSNDQYHHRAMANNQMGPPSSSSSL 197
>At3g14180.1 68416.m01792 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 443
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSL 139
N++N HH + NN + N+NN L
Sbjct: 417 NTSNDHHHSRKNNINAIVNNNNDL 440
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 26.6 bits (56), Expect = 6.8
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = +2
Query: 47 KAKPHKFNSNNRHHKANSNNRHHKANSNNSLH 142
+ +PH+ + N +H N N+ H+ +++ H
Sbjct: 447 RGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHH 478
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 26.6 bits (56), Expect = 6.8
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = +2
Query: 47 KAKPHKFNSNNRHHKANSNNRHHKANSNNSLH 142
+ +PH+ + N +H N N+ H+ +++ H
Sbjct: 463 RGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHH 494
>At5g42050.1 68418.m05119 expressed protein similar to gda-1 [Pisum
sativum] GI:2765418
Length = 349
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 68 NSNNRHHKANSNNRHHKANSNNSLHKANSNNSLHK 172
+ +++ K NR ++ N+NN ++ + NN L K
Sbjct: 165 DEDHQIQKGGKKNRKNQQNNNNQRNEDDKNNGLDK 199
>At2g15860.1 68415.m01818 expressed protein and genefinder
Length = 512
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 359 HRSLFNNNRKGKVSPNRLSL 418
H +L N RKGK+SP++ SL
Sbjct: 262 HYTLLFNRRKGKLSPDQKSL 281
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.275 0.102 0.280
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,053,564
Number of Sequences: 28952
Number of extensions: 34667
Number of successful extensions: 186
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 18 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 47 (21.9 bits)
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