Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E12
         (276 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   0.26 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   5.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   7.3  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    19   9.7  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 0.26
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 102 CSDAAVQVWNKKPFSNASDLCEAFHKYLMDLSFEEKLV 215
           C+D  V +   +  +  +++C+A HK L  L    KLV
Sbjct: 195 CNDPLVALVVNENNTTVNNICQATHKQLFQLVQWAKLV 232


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 83  WQCCRIMLG 109
           W CC ++LG
Sbjct: 7   WLCCLLLLG 15


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 83  WQCCRIMLG 109
           W CC ++LG
Sbjct: 7   WLCCLLLLG 15


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 217 TTNFSSKLRSIKYL*NASHRSDAFEKGFLF 128
           T NF +    IK++  A H    F  G  F
Sbjct: 712 TLNFRNSDELIKFISIAKHNVRTFSAGGFF 741


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -3

Query: 58  PKLFTSEMVICKDMPN 11
           P+  + + + C+D+PN
Sbjct: 66  PRSISEDPLNCRDLPN 81


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 19.0 bits (37), Expect = 9.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 71  KLMTTKVVHF 42
           K MT KV+HF
Sbjct: 78  KEMTKKVIHF 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,865
Number of Sequences: 336
Number of extensions: 1235
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4577651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)