Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E11
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   0.90 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.8  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 616 FRKVLLIFVCSGIYSYTQ 563
           F  +LLI  CSG++S +Q
Sbjct: 269 FGTILLIMTCSGVHSESQ 286


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 487 TLSEPWMILRPTWI 446
           TL E WM L P WI
Sbjct: 499 TLIETWMPLLPQWI 512


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 465 YYVQLGYISLREWYRVE 415
           + V +GYI   EW +VE
Sbjct: 101 FVVVMGYIGFIEWDKVE 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,262
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)