Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E11
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.8  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   9.8  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   9.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +3

Query: 324  SSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRN 464
            S+  V  +   G  +V +G+Q  G      +QP T++  +  +  +N
Sbjct: 909  SNSQVQGVAVPGSGIVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQN 955


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 484 LSEPWMILRPTWI 446
           L E WM L P WI
Sbjct: 498 LIEHWMPLLPNWI 510


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 382 VKCSVLPIQLILNPVPFAETYVSKLDVISSTVPI 483
           V CSV     + +PV  ++TY+  L V+   VP+
Sbjct: 47  VSCSVS--WEVHDPVTNSDTYIGFLFVLGLIVPV 78


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 265 CSNSSEGQTNFNPTNLKPFFSKRSMIVPTRP 173
           C   +   T  NP ++K   +   M+VP++P
Sbjct: 379 CDRRNGKTTEENPKSIKSGDAAIVMLVPSKP 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,546
Number of Sequences: 438
Number of extensions: 3706
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)