Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E08
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79757-5|CAB02126.2| 551|Caenorhabditis elegans Hypothetical pr... 29 2.4
AY491013-1|AAS18682.1| 464|Caenorhabditis elegans nose resistan... 29 2.4
AY491012-1|AAS18681.1| 573|Caenorhabditis elegans nose resistan... 29 2.4
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 28 4.2
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 27 7.3
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 27 7.3
Z81587-10|CAH10780.1| 483|Caenorhabditis elegans Hypothetical p... 27 9.7
Z81587-9|CAB04708.2| 511|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 27 9.7
U50197-3|AAA91256.2| 327|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41007-17|AAA82261.1| 507|Caenorhabditis elegans Hypothetical p... 27 9.7
>Z79757-5|CAB02126.2| 551|Caenorhabditis elegans Hypothetical
protein F55B12.5 protein.
Length = 551
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 162 RKPSCPSSPVYQQPLAVDPSSF 97
+KP P SP YQ+P A DP+ F
Sbjct: 201 QKPIPPESPNYQKPEAGDPNGF 222
>AY491013-1|AAS18682.1| 464|Caenorhabditis elegans nose resistant
to fluoxetine protein.
Length = 464
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 162 RKPSCPSSPVYQQPLAVDPSSF 97
+KP P SP YQ+P A DP+ F
Sbjct: 89 QKPIPPESPNYQKPEAGDPNGF 110
>AY491012-1|AAS18681.1| 573|Caenorhabditis elegans nose resistant
to fluoxetine protein.
Length = 573
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 162 RKPSCPSSPVYQQPLAVDPSSF 97
+KP P SP YQ+P A DP+ F
Sbjct: 198 QKPIPPESPNYQKPEAGDPNGF 219
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 408 SPSCARDRNPDSGCKPVCTQSSSLSAPSW 322
S SC +PDS C+P+ ++S P W
Sbjct: 231 SQSCDAGASPDSKCRPLTHFCFTVSEPGW 259
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 399 CARDRNPDSGCKPVCTQSSSLSAPSWPP 316
C + + P C P CTQS S S + P
Sbjct: 367 CVQQQQPMQQCAPACTQSCSQSCSAAQP 394
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 399 CARDRNPDSGCKPVCTQSSSLSAPSWPP 316
C + + P C P CTQS S S + P
Sbjct: 367 CVQQQQPMQQCAPACTQSCSQSCSAAQP 394
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 312 LEGANLEQITMKTVCKQVYSHYPDFDLAHKKDFIKATVK 428
L GA M++VC + SH FD++ + A VK
Sbjct: 646 LIGAMFPSERMRSVCSSIESHLDPFDVSLLSPLLAANVK 684
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 312 LEGANLEQITMKTVCKQVYSHYPDFDLAHKKDFIKATVK 428
L GA M++VC + SH FD++ + A VK
Sbjct: 646 LIGAMFPSERMRSVCSSIESHLDPFDVSLLSPLLAANVK 684
>Z81587-10|CAH10780.1| 483|Caenorhabditis elegans Hypothetical
protein T06G6.3b protein.
Length = 483
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 249 ADKKAKRPPTDEEIKKYVKQI--LEGANLEQITMKTVCKQVYSHY 377
AD K K+ + EI+K ++I + EQ K VCK+ +H+
Sbjct: 142 ADAKKKQKSLNREIEKLKERIEKMAAEEPEQEAKKDVCKRNVNHF 186
>Z81587-9|CAB04708.2| 511|Caenorhabditis elegans Hypothetical
protein T06G6.3a protein.
Length = 511
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 249 ADKKAKRPPTDEEIKKYVKQI--LEGANLEQITMKTVCKQVYSHY 377
AD K K+ + EI+K ++I + EQ K VCK+ +H+
Sbjct: 170 ADAKKKQKSLNREIEKLKERIEKMAAEEPEQEAKKDVCKRNVNHF 214
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 399 CARDRNPDSGCKPVCTQSSSLS 334
C + + P S C+P C QS S S
Sbjct: 371 CIQQQQPISQCQPACQQSCSAS 392
>U50197-3|AAA91256.2| 327|Caenorhabditis elegans Hypothetical
protein F25E2.3 protein.
Length = 327
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 353 HSLHRYLLQVGPLEDLLHVFLYLLVSGRPFC 261
HSLH Y ++ G ++ + + + GR FC
Sbjct: 86 HSLHSYFIKTGSVDKPILYMIDRIRDGRSFC 116
>U41007-17|AAA82261.1| 507|Caenorhabditis elegans Hypothetical
protein C33H5.2 protein.
Length = 507
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 361 CLHTVFIVICSKLAPSRICFTYFFISSSVGGRFAFLSAGA 242
C V +V C+ A + FT+ GGRFA L A
Sbjct: 2 CRRNVILVFCASFA---LFFTFIIFGRYPGGRFAVLYENA 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,735,731
Number of Sequences: 27780
Number of extensions: 146675
Number of successful extensions: 541
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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