Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E08
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   2.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.1  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   4.0  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.0  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 316 SRICFTYFFISSSVGGRFAFLS 251
           SRI F  FF++ +V   FA+LS
Sbjct: 427 SRIVFPLFFLAINVFYWFAYLS 448


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -3

Query: 425 DCRLDEVLLVREIEIRIVAVNLFAHSLHRYLLQV--GPLE-DLLHVFLYLLVSGR 270
           +C+L+++LL     + +   N+ +H    Y+L+   G +  D    + YL + G+
Sbjct: 245 NCKLNDILLTVRPHLELTFENILSHINTVYVLRTKKGVMRVDASEEYSYLRLKGQ 299


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -3

Query: 425 DCRLDEVLLVREIEIRIVAVNLFAHSLHRYLLQV--GPLE-DLLHVFLYLLVSGR 270
           +C+L+++LL     + +   N+ +H    Y+L+   G +  D    + YL + G+
Sbjct: 245 NCKLNDILLTVRPHLELTFENILSHINTVYVLRTKKGVMRVDASEEYSYLRLKGQ 299


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 360 VCTQSSSLSAPSWPPRGFASRISLSPRQWAAVLLSYPLARQ 238
           +C  +++    S     + +  SLS   + AVL  YPL R+
Sbjct: 523 ICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRR 563


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 360 VCTQSSSLSAPSWPPRGFASRISLSPRQWAAVLLSYPLARQ 238
           +C  +++    S     + +  SLS   + AVL  YPL R+
Sbjct: 491 ICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRR 531


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 128 NSLWRWTLLLSGR 90
           N LWRW  L  G+
Sbjct: 56  NGLWRWIRLTYGQ 68


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 128 NSLWRWTLLLSGR 90
           N LWRW  L  G+
Sbjct: 94  NGLWRWIRLTYGQ 106


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 129  QQPLAVDPSSFR 94
            QQP+  DPS F+
Sbjct: 982  QQPIMTDPSPFK 993


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,696
Number of Sequences: 438
Number of extensions: 1837
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)