Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E07
(598 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|... 100 1e-22
SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces pombe... 56 4e-09
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 28 0.90
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 28 0.90
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 26 3.6
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 26 4.8
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 6.3
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 25 6.3
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 25 6.3
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 25 8.4
>SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 156
Score = 100 bits (240), Expect = 1e-22
Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Frame = +1
Query: 94 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 273
+ VG LP + L+E+ P V E + K ++ VPGAFTP CS + +PGY+ N +
Sbjct: 2 VAVGSTLPKVTLWENKPEEVV---EFPSQGKFIIVGVPGAFTPPCS-SQVPGYIANEKQF 57
Query: 274 KSEGVSEIVCVSVNDPYVMAAWGAQHN--TKGKVRMLADPNGAFIKALDLGTNLPP-LGG 444
++G+S I V+VND +V AW + + V +AD NG F KA D G + LG
Sbjct: 58 AAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDASGLLGP 117
Query: 445 FRSKRFSMVINDSKVEELNVEPDGTGLSCSLADKL 549
RSKR++ V+ + KV ++ +E + T + S ADK+
Sbjct: 118 LRSKRYAAVVENGKVVKVFIENEVTDVDISSADKV 152
>SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 195
Score = 56.0 bits (129), Expect = 4e-09
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Frame = +1
Query: 94 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 273
I+VGD++P + L D + +ITA K +V+FA P A TPGC+K G+ N K+
Sbjct: 46 IQVGDVIPDITL-PDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGC-GFRDNYPKI 103
Query: 274 KSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPPLGG-FR 450
++ E++ +S + A+ + N +L+DP G IK LG P G FR
Sbjct: 104 QASDY-EVLGLSFDTSKAQKAFKDKQNF--PYHLLSDPKGELIK--KLGAEKPGGGKLFR 158
Query: 451 SK-RFSMVINDSKVEELNVEP 510
S F V+E+++ P
Sbjct: 159 SHWIFEKGTGKCIVKEIDISP 179
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 28.3 bits (60), Expect = 0.90
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 31 STFNNGVYVRALHTSKIAMAPIKVGDMLPSLDL 129
STFN+G+ +RAL AP+ +L DL
Sbjct: 382 STFNSGISLRALRKEMGNTAPVSSNQLLKDADL 414
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 0.90
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 572 NSNYFLTLSLSASEHDNPVPSGSTFNSSTLLSLITIEKRF 453
N N F+ + S EHD +P+G + LL EK F
Sbjct: 352 NQNKFIPIGGSWVEHDTNIPNGESLIRQFLLGQHFFEKEF 391
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 26.2 bits (55), Expect = 3.6
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -3
Query: 587 SKAARNSNYFLTLSLSA-SEHDNPVPSGSTFNSSTLLSLITIEKRFERNPPNGGRFVPRS 411
S+ +S + L S+ A + +N VP+ FN S + I+K N GR VPR+
Sbjct: 1128 SQGITDSAFQLLASIPALANQENLVPA--FFNKFREASTLKIQKALLTRLLNSGRIVPRT 1185
Query: 410 -RALMNA 393
R +NA
Sbjct: 1186 DRRAVNA 1192
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 419 PRSRALMNAPFGSASIR-TFPLVLCWAPQAAITYGSFTDTHT 297
P S +NA A TFP+VL W A + SF D H+
Sbjct: 697 PGSVEAVNAVISIAKANPTFPIVLQWTGGRAGGHHSFEDFHS 738
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +1
Query: 247 GYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQH-----NTKGKVRMLAD 384
GY+ +++ + EG + + V++P A W +H N + + +L D
Sbjct: 329 GYLHSSELLYPEGTEQQIISLVDEPNQNALWIIEHEHSQDNNRSNIELLKD 379
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 25.4 bits (53), Expect = 6.3
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 2/127 (1%)
Frame = +1
Query: 28 ISTFNNGVYVRALHTSKIAMAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVP 207
+ +F+N YV++ + +++ + +++P + DS A T +T+ K P
Sbjct: 305 VRSFSN--YVKSSNVVNPSLSQASL-EIIPRKSMKRDSNAQNDGTSTMTSKLK------P 355
Query: 208 GAFTPGCSKTHLPGYVQNADK--MKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLA 381
PG ++ A+K E I P+ WGA+ + +LA
Sbjct: 356 SVGLSNTRDAPKPGGLRRANKPCFNKETKGSIFSKENKGPFTCNPWGAKKVSPPPCEVLA 415
Query: 382 DPNGAFI 402
D N A I
Sbjct: 416 DLNTASI 422
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 281 SLFILSAFCTYPGK*VLEHPGVNAPGTANKTTFFPAVISQVF 156
S+F +AF +Y G E+ G+ A T N FP + QVF
Sbjct: 274 SVFSTAAF-SYAGT---EYIGIAASETKNPAKAFPKAVKQVF 311
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 390 IWISKHSYLSLGVVLGTPSGHNIRIVHRHAYYFRN 286
I S S+ S+ L G IR +H H +F+N
Sbjct: 9 IKFSSKSHYSVSCFLIATQGAKIRQIHTHNTFFKN 43
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,944
Number of Sequences: 5004
Number of extensions: 55748
Number of successful extensions: 147
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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