Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_E05
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    26   0.33 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    26   0.33 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    26   0.33 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.1  
AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.       22   5.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.3  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 376 VLLILMRPLAATSSTPPQVSGDRKLSVSTFNCVSFLI 266
           +LL L   L   + T PQVS    L  + FNC+ F++
Sbjct: 249 ILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMV 285


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 376 VLLILMRPLAATSSTPPQVSGDRKLSVSTFNCVSFLI 266
           +LL L   L   + T PQVS    L  + FNC+ F++
Sbjct: 249 ILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMV 285


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 376 VLLILMRPLAATSSTPPQVSGDRKLSVSTFNCVSFLI 266
           +LL L   L   + T PQVS    L  + FNC+ F++
Sbjct: 249 ILLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMV 285


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -3

Query: 633  YIFIITILYKIGKKGETLINI-INVYTIYNK 544
            Y F +   YK+ K GE +  I  N + I +K
Sbjct: 1028 YFFYLVKFYKVSKSGELIHKIETNEHEIIDK 1058


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -3

Query: 633 YIFIITILYKIGKKGETLINI-INVYTIYNK 544
           Y F +   YK+ K GE +  I  N + I +K
Sbjct: 309 YFFYLVKFYKVSKSGELIHKIETNEHEIIDK 339


>AY531876-1|AAT08870.1|   38|Tribolium castaneum unknown protein.
          Length = 38

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 675 RTHTGRRQINHMMNYIFIITILYKIGKKGETLI 577
           RT  G+R   HM+    I  +   IG+  E  I
Sbjct: 6   RTGLGKRLFEHMLQTESIEPVKMAIGRPSEKFI 38


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 81  EARKRLAEVPKDTKLYSDLLTTLI 152
           +A K L   PK  K+YS LL T +
Sbjct: 11  DALKILGIGPKSNKIYSFLLLTTL 34


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 496 AHTLVISLTIYLNVNFLIIY 555
           A  L+++LT+  NVN  + Y
Sbjct: 210 AENLLVTLTVLPNVNSTVYY 229


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +1

Query: 523 IYLNVNFL--IIYCVDVNNIDKCFPLFAYFI*YCNNKYVVHHVIYLTPPGMC 672
           I+ +  FL  II+ +  + +   FP++ Y I       V   +  +  PG+C
Sbjct: 371 IHTDTYFLRDIIFAIRQHAVTAKFPIYLYRISVETKLNVFKRIGNIKAPGVC 422


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,303
Number of Sequences: 336
Number of extensions: 3028
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)