Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E05
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h at... 150 1e-36
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 30 1.3
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 29 2.3
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 29 2.3
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 2.3
AF016686-8|AAB66236.1| 388|Caenorhabditis elegans Hypothetical ... 29 4.1
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 29 4.1
AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical ... 29 4.1
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 28 7.1
>AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h
atpase protein 8 protein.
Length = 226
Score = 150 bits (363), Expect = 1e-36
Identities = 74/156 (47%), Positives = 102/156 (65%)
Frame = +3
Query: 3 QSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSDLLTTLIVQALFQLMEP 182
Q+SN LN RL+ LK REDH+ VLDEAR L+ + D Y +L L++Q L QL+E
Sbjct: 71 QASNSLNAGRLRCLKAREDHIGAVLDEARSNLSRISGDAARYPAILKGLVMQGLLQLLEK 130
Query: 183 SVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTCGGVELVAARGRI 362
V +R R+ D VE +L + + T++ +D ++FL ++ GGVEL A G+I
Sbjct: 131 EVVLRCREKDLRLVEQLLPECLDGLQKEWGSTTKVVLDKQNFLPSESAGGVELSARAGKI 190
Query: 363 KISNTLESRLELIAQQLLPEIRTALFGRNPNRKFTD 470
K+S+TLESRLELIA Q++P++RTALFG NPNR F D
Sbjct: 191 KVSSTLESRLELIANQIVPQVRTALFGPNPNRSFFD 226
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +1
Query: 400 SLNSSYRRFVQRCSVATLTVNSPIKLNSGDRFAHTLVISLTIYLNVNFLIIYCVDVNNID 579
++N S +Q + + + SPI GDRF V+ + I V +LI C
Sbjct: 40 NINDSMGGMIQTVFLISFMIGSPICGYLGDRFNRKYVMLVGI---VIWLICVCASTFIPR 96
Query: 580 KCFPLFAYF 606
FPLF +F
Sbjct: 97 NLFPLFLFF 105
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 177 EPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 326
+P + I+V+QV + V+ ++ D +TK ++ L E+ LSPD C
Sbjct: 173 DPKLAIKVQQVLEQYVQKVI---DGDIETKYERPKFLTNQYETELSPDDC 219
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 177 EPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 326
+P + I+V+QV + V+ ++ D +TK ++ L E+ LSPD C
Sbjct: 186 DPKLAIKVQQVLEQYVQKVI---DGDIETKYERPKFLTNQYETELSPDDC 232
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 406 NSSYRRFVQRCSVATLTVNSPIKLNSGDRFAHTLVISLTIYLNVNFLIIYCV 561
++ +RRFV V L N+ + D + V+ + L V FLII+C+
Sbjct: 1432 DTEFRRFVYFRDVEPLNDNNDTEWTDEDSGSLMWVVFIIFVLGVIFLIIFCI 1483
>AF016686-8|AAB66236.1| 388|Caenorhabditis elegans Hypothetical
protein R07C3.6 protein.
Length = 388
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 496 AHTLVISLTIYLNVNF---LIIYCVDVNNIDKCFPLFAYFI*YCNNKYVVHHVIY 651
A+ VI+ YLN N L C + + +K PLF + C N VV+ + Y
Sbjct: 4 AYQSVIASITYLNPNIRFQLSRRCPSLKSAEKSAPLFINKLKLCTNSVVVNDISY 58
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +3
Query: 174 MEPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 326
++ + V+++ K VE +ARA+++YK+ + K ++ D E+ +S D+C
Sbjct: 137 VKKETNVNVKEISK--VELKVARAREEYKSYVDKYELVREDFETKMS-DSC 184
>AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical
protein F56D12.6a protein.
Length = 968
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +3
Query: 174 MEPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 326
++ + V+++ K VE +ARA+++YK+ + K ++ D E+ +S D+C
Sbjct: 154 VKKETNVNVKEISK--VELKVARAREEYKSYVDKYELVREDFETKMS-DSC 201
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 131 RSSYNTHCTGSIPV-NGAIGDHPRPSSGQVTSRVDPC*SSTGLQDKDQEGHTVEGRHREL 307
R + NT + V NG + S+ T+ S+ ++D + + E + + L
Sbjct: 154 RLTENTETAANTNVENGTASTNGTASTATPTAATSSTSRSSSTDEEDNDAVSKEEKEKRL 213
Query: 308 PVSGHLW 328
P+ HLW
Sbjct: 214 PLLTHLW 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,234,753
Number of Sequences: 27780
Number of extensions: 281503
Number of successful extensions: 744
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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