Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_E05
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.17
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.17
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.17
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 4.7
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 4.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 6.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 6.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 6.2
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 6.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 8.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 8.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 8.2
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.17
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 376 VLLILMRPLAATSSTPPQVSGDRKLSVSTFNCVSFLI 266
+LL L L + T PQVS L S FNC+ F++
Sbjct: 232 ILLSLTVFLNLVAETLPQVSDAIPLLGSYFNCIMFMV 268
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.17
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 376 VLLILMRPLAATSSTPPQVSGDRKLSVSTFNCVSFLI 266
+LL L L + T PQVS L S FNC+ F++
Sbjct: 232 ILLSLTVFLNLVAETLPQVSDAIPLLGSYFNCIMFMV 268
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.17
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 376 VLLILMRPLAATSSTPPQVSGDRKLSVSTFNCVSFLI 266
+LL L L + T PQVS L S FNC+ F++
Sbjct: 232 ILLSLTVFLNLVAETLPQVSDAIPLLGSYFNCIMFMV 268
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.1 bits (57), Expect = 0.17
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 376 VLLILMRPLAATSSTPPQVSGDRKLSVSTFNCVSFLI 266
+LL L L + T PQVS L S FNC+ F++
Sbjct: 300 ILLSLTVFLNLVAETLPQVSDAIPLLGSYFNCIMFMV 336
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 427 VQRCSVATLTVNSPIKLNSGDRFAHTLVISLTIYLNVNFLII 552
V CS AT+ V S + L+ V+ LT+ L+ + +++
Sbjct: 156 VLACSTATVYVMSVVGLSKAPAQIPVDVLVLTVTLSASAMVL 197
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 359 HQDQQHFGIPSRVDRST 409
HQ QQH+G +V + T
Sbjct: 22 HQHQQHYGAAVQVPQQT 38
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 237 QGSTLLVTCPLDGRGWSPMAPLTGI 163
+G ++C LDG+G PLT +
Sbjct: 574 RGGKGALSCLLDGKGDVAFVPLTAL 598
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 237 QGSTLLVTCPLDGRGWSPMAPLTGI 163
+G ++C LDG+G PLT +
Sbjct: 574 RGGKGALSCLLDGKGDVAFVPLTAL 598
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 237 QGSTLLVTCPLDGRGWSPMAPLTGI 163
+G ++C LDG+G PLT +
Sbjct: 574 RGGKGALSCLLDGKGDVAFVPLTAL 598
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 401 DQLETGFQSVADLDASPSSNKFNS 330
D+LETGF ++ D+ K+ S
Sbjct: 8 DKLETGFSKLSSSDSKSLLKKYLS 31
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 525 LFKRKLSYYIL 557
LFKR+ SYY++
Sbjct: 236 LFKREFSYYLI 246
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +3
Query: 525 LFKRKLSYYIL 557
LFKR+ SYY++
Sbjct: 236 LFKREFSYYLI 246
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 627 ICSSSCDLFDASRYVYG 677
+CS C++ A +YV G
Sbjct: 586 VCSLPCEVGQAKKYVAG 602
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,466
Number of Sequences: 438
Number of extensions: 3697
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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