Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D24
(478 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_2285| Best HMM Match : IncA (HMM E-Value=3.2) 31 0.49
SB_4793| Best HMM Match : DUF1279 (HMM E-Value=0.31) 31 0.64
SB_23351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_56769| Best HMM Match : UIM (HMM E-Value=0.0025) 28 4.5
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 27 6.0
SB_59750| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_34308| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_775| Best HMM Match : bZIP_2 (HMM E-Value=3) 27 7.9
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_53092| Best HMM Match : TT_ORF2 (HMM E-Value=3.4) 27 7.9
SB_28525| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_5508| Best HMM Match : bZIP_2 (HMM E-Value=3) 27 7.9
>SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 31.9 bits (69), Expect = 0.28
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +1
Query: 34 NKADLSKALAKRETHATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQ 213
++ + K THA S S+ A E T+LG ++LR +LD+
Sbjct: 36 DEESIPKTSTSLRTHAAHSMASQTAGTASAVTSFITEGAATSLGLQFLREEYPNLDENLI 95
Query: 214 NLISKQRG 237
S QRG
Sbjct: 96 RFQSDQRG 103
>SB_2285| Best HMM Match : IncA (HMM E-Value=3.2)
Length = 293
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 73 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 237
THA T S+ + E T LG ++LR +LD+ S QRG
Sbjct: 49 THAAHKTASQTTGTASAETSFITEGAATRLGLQFLREEYPNLDENLIQFQSDQRG 103
>SB_4793| Best HMM Match : DUF1279 (HMM E-Value=0.31)
Length = 396
Score = 30.7 bits (66), Expect = 0.64
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 73 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 237
THA T S+ A T + E T LG ++LR +L++ S +RG
Sbjct: 49 THAAHRTASQTAGTTSAETSFITEGAATRLGLQFLREEYPNLNENLIRFQSDRRG 103
>SB_23351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +1
Query: 73 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGFQFV 249
THA S + A + V E +T LG + LR LD+ S +RG + +
Sbjct: 49 THAAHSMALQTAGTASAETSVITEGAETRLGLQSLREEYPDLDENLIRFQSDRRGKKLI 107
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 253 PTDDWFPGLADLKNELQSWDWCYGKTPIFTVSRTFPVPAEILAPSKV 393
PT FP D + LQ W Y K+ IF P+P P ++
Sbjct: 313 PTKLPFPATEDNRESLQQWLLDYYKSSIFNTCEHQPLPLMDSIPIRI 359
>SB_56769| Best HMM Match : UIM (HMM E-Value=0.0025)
Length = 358
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 94 RSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGF 240
+ + L + +ESL + YLRTP H+ L +K+R F
Sbjct: 58 KKTIFELIQTEVEEAIESLSQMVARPYLRTPRSHIIQATSLLANKRRTF 106
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 190 VPECGGTRSLAQFVGFPQSLD 128
+P GGT+ L + VG P SLD
Sbjct: 48 LPGAGGTQRLPRLVGLPDSLD 68
>SB_59750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +1
Query: 73 THATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 237
THA T S+ + E +T LG ++LR +L + S +RG
Sbjct: 49 THAAHRTASQTTGTASAETSFITEGAETRLGLQFLREKYPNLRESLLQFQSDRRG 103
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 217 GFVLRHLDGVPECGGTRSLAQFVGFPQSLDY--PSRSDSPPRTASMPSRESH 68
GF+L+ L G P G + GFP + + P D P MP + +
Sbjct: 245 GFILKGLQGPPGLNGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGY 296
>SB_34308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 70 ETHATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGFQFV 249
E H T+ R L R ++S+QT +E + +HL+ +RG+++V
Sbjct: 263 EHHVTSDCRCIKQKLPKHTQRAPMQSIQTMAQFELVSLNVVHLE-------CSRRGYEYV 315
Query: 250 NPTDDWFPGLA 282
D+F A
Sbjct: 316 LVVVDYFTRFA 326
>SB_775| Best HMM Match : bZIP_2 (HMM E-Value=3)
Length = 322
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 76 HATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 237
HA T S+ A T + E LG ++LR +L++ S +RG
Sbjct: 50 HAAHRTASQTAGTTSAETSFITEGAAARLGLQFLREEYPNLNENLLRFQSDRRG 103
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 202 HLDGVPECGGTRSLAQFVGFPQSLDYPSRSDSPPRTASMPSRESHVLQVPC*DLP 38
H+DG + S G+ Q+ D PS D +T +PS Q P D+P
Sbjct: 1561 HMDGYTQTPDVPS--HMDGYTQTPDIPSHMDDHTQTPDIPSHMDDHTQTP--DIP 1611
>SB_53092| Best HMM Match : TT_ORF2 (HMM E-Value=3.4)
Length = 598
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 433 EQGLINDVTLNIPP 474
+ GL+NDVTL++PP
Sbjct: 85 DSGLLNDVTLSVPP 98
>SB_28525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 202 HLDGVPECGGTRSLAQFVGFPQSLDYPSRSDSPPRTASMPSRESHVLQVPC*DLP 38
H+DG + S G+ Q+ D PS D +T +PS Q P D+P
Sbjct: 233 HMDGYTQTPDVPS--HMDGYTQTPDIPSHMDDHTQTPDIPSHMDDHTQTP--DIP 283
>SB_5508| Best HMM Match : bZIP_2 (HMM E-Value=3)
Length = 322
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 76 HATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRG 237
HA T S+ A T + E LG ++LR +L++ S +RG
Sbjct: 50 HAAHRTASQTAGTTSAETSFITEGAAARLGLQFLREEYPNLNENLLRFQSDRRG 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.132 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,027,254
Number of Sequences: 59808
Number of extensions: 320680
Number of successful extensions: 728
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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