Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D24
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 32 0.19
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 28 3.0
Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical p... 27 7.0
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81073-8|CAN86905.1| 271|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81073-7|CAB03032.2| 248|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical
protein C45G3.3 protein.
Length = 289
Score = 41.9 bits (94), Expect = 2e-04
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Frame = +1
Query: 4 YHHCTLLVNANKADLSKALA-----KRETHATASTRS-EVANLTDLDNRVTVESLQTALG 165
YHH TLLV A+ LSK+L K E++AT S R+ V L D VE + A+
Sbjct: 155 YHHLTLLVGADLQVLSKSLKSPWRDKIESNATRSVRAPAVGFLKQDDANANVEQSKLAIV 214
Query: 166 YEYLRTPALHLDDGGQNLISKQRGFQFVNPTDDWFPG--LADLKNELQSWDWCYGKTPIF 339
Y + + ++ + VN ++ ++ + +EL++W W YGK+P F
Sbjct: 215 EAYRK-------------LFEESHIKTVNVAEEVKKNAEISKIFDELKAWKWIYGKSPKF 261
Query: 340 TVSR 351
SR
Sbjct: 262 QYSR 265
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 32.3 bits (70), Expect = 0.19
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 121 LDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGFQFVNPTDD 264
L +R E A G+ + A H D +NL+ +Q FQF+NP D
Sbjct: 197 LHSREFYEQCFKAAGFSQIEWIAPHFTDHAKNLLGEQFCFQFLNPPCD 244
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 37 KADLSKALAKRETHATASTRSEVANLTDLDNRVTVESLQTAL 162
K +S LA++ TH++ ST V N +L +++ TAL
Sbjct: 926 KKKVSPLLARQATHSSKSTTLSVPNRANLRETKSIDETPTAL 967
>Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical
protein F32D8.13 protein.
Length = 187
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 94 RSEVANLTDLDNRVTVESLQTALGYEYL----RTPALHLDDGGQNLISKQRGFQFVNPTD 261
R+ +++ D D V + + YEY RT + ++ ++ KQRG+QFV D
Sbjct: 88 RAAISSTMDSDI-VIISDCRRRTDYEYFSANYRTVTIRIETSEED--RKQRGYQFVEGVD 144
Query: 262 D 264
D
Sbjct: 145 D 145
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 322 GKTPIFTVSRTFPVPAEILAPSKVY-SATQELVITMTVEQGLINDV 456
G +P T PVP+ I +PSKV + Q+ +IT TV +I V
Sbjct: 335 GVSPSPVPVSTPPVPSTIPSPSKVVPNPPQKSLITPTVPPSMIQTV 380
>Z81073-8|CAN86905.1| 271|Caenorhabditis elegans Hypothetical
protein F30F8.5b protein.
Length = 271
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 52 KALAKRETHATASTRSEVANLTDLDNRV-TVESLQTALGYEYL--RTPALHLDDGGQNLI 222
K+ K++T AT S ++ + + T E A+G E + + D +NL
Sbjct: 10 KSAEKKDTDATPRAHSPEIDVEVIKSDCSTPEKQNGAVGNEQQMNNSTSTRRTDSNKNLS 69
Query: 223 SKQRGFQFVNPTDDWFPGLADLKNELQSWDW 315
+ + + T D G +L + L SWDW
Sbjct: 70 PPPQRLRTSSSTSD---GTENLISSLSSWDW 97
>Z81073-7|CAB03032.2| 248|Caenorhabditis elegans Hypothetical
protein F30F8.5a protein.
Length = 248
Score = 26.6 bits (56), Expect = 9.2
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 52 KALAKRETHATASTRSEVANLTDLDNRV-TVESLQTALGYEYL--RTPALHLDDGGQNLI 222
K+ K++T AT S ++ + + T E A+G E + + D +NL
Sbjct: 10 KSAEKKDTDATPRAHSPEIDVEVIKSDCSTPEKQNGAVGNEQQMNNSTSTRRTDSNKNLS 69
Query: 223 SKQRGFQFVNPTDDWFPGLADLKNELQSWDW 315
+ + + T D G +L + L SWDW
Sbjct: 70 PPPQRLRTSSSTSD---GTENLISSLSSWDW 97
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 181 CGGTRSLAQFVGFPQSLDYPSRSDSPPRTASMPSRESHV 65
C G+ ++Q GFP +L D+ R ++P + V
Sbjct: 265 CPGSFGVSQSAGFPDTLQMLIEEDTTERKINLPQNSTSV 303
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical
protein C09G1.2 protein.
Length = 1115
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 317 HQSQLCNSFFKSARPGNQSSVGLTNWN-PRCFEIRFCPPSSRWS 189
HQS C S FK NQ+ L +++ + +++ C PS + S
Sbjct: 474 HQSMQCQSEFKCVSSSNQTEKDLKSFSIKKNVQVQPCSPSLKSS 517
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.132 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,794,981
Number of Sequences: 27780
Number of extensions: 228384
Number of successful extensions: 711
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -