BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_D22 (480 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 187 4e-48 SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002 SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002 SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24) 31 0.49 SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49 SB_22093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5 SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5 SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 27 6.1 SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1 SB_39040| Best HMM Match : ChaB (HMM E-Value=4.2) 27 8.0 SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09) 27 8.0 SB_7044| Best HMM Match : PAN (HMM E-Value=1.3e-07) 27 8.0 SB_55065| Best HMM Match : ChaB (HMM E-Value=4.2) 27 8.0 SB_9070| Best HMM Match : TPR_1 (HMM E-Value=2.7e-39) 27 8.0 >SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) Length = 427 Score = 187 bits (456), Expect = 4e-48 Identities = 85/119 (71%), Positives = 101/119 (84%) Frame = +1 Query: 10 MADVDVEVPANPVLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 189 M+D + + +GGAMD+NTALQEVLKTALIH GL GLHEAAK+LDKR+A LC+L+ Sbjct: 1 MSDAEGDDTTQQPAAGGAMDINTALQEVLKTALIHDGLSRGLHEAAKSLDKREAHLCILS 60 Query: 190 ENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 366 NCDEA Y KLV+ALC EH IPL+KVD++KKLGEWAGLCKIDK+GKARK+VGCSCVV+K Sbjct: 61 NNCDEAMYVKLVEALCAEHGIPLLKVDDSKKLGEWAGLCKIDKEGKARKVVGCSCVVVK 119 >SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 68 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Frame = +1 Query: 157 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 300 D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53 >SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 104 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Frame = +1 Query: 157 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 300 D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53 >SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24) Length = 172 Score = 31.1 bits (67), Expect = 0.49 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +1 Query: 127 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 291 +G++ ++ ++A L V+A + D + ALC + Q+P V +LG+ Sbjct: 47 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 101 >SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 263 Score = 31.1 bits (67), Expect = 0.49 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +1 Query: 127 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 291 +G++ ++ ++A L V+A + D + ALC + Q+P V +LG+ Sbjct: 138 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 192 >SB_22093| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 742 Score = 28.3 bits (60), Expect = 3.5 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Frame = +1 Query: 133 LHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK----LGEWAG 300 LH+ LD A + +L N + Q L P+ DN + + ++ G Sbjct: 363 LHQRGVNLDTTTANMTILTSNIIQQLNNVSFQGLTG----PVSFTDNQRNGIIAIKQFQG 418 Query: 301 LCKIDKDGKARKIVGC 348 + +DK K R ++GC Sbjct: 419 MAPLDKPAKIRLVIGC 434 >SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1957 Score = 28.3 bits (60), Expect = 3.5 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +1 Query: 115 GGLVHGLHEAAK--ALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQI 252 G L LHE +K +L R A+ C ++E + +++V N H I Sbjct: 167 GSLHFVLHETSKEISLPDRVAIFCDVSEGLEFLKSRRIVHCFLNSHSI 214 >SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) Length = 847 Score = 27.5 bits (58), Expect = 6.1 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = +2 Query: 236 VMNIKSHLLRSITIRSSANGPVSVKSTKTARLGKSSVALA*LSRISVRRRQRWTYSKTTS 415 V NIK + R +++ + V +++ KT +S V ++ L +S RR++R+T + Sbjct: 477 VTNIK--VQRQNSVKRREDKIVDLETRKTNSFTRSHVCVSGLKSMSKRRKERYTTCRAVP 534 Query: 416 SLQ 424 +Q Sbjct: 535 IIQ 537 >SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 621 Score = 27.5 bits (58), Expect = 6.1 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +1 Query: 37 ANPVLSGGAMDVNTALQEV-LKTALIHG-GLVHGLHEAAKALDKRQ 168 A VL GGA+DVN AL+ + + TA + G G V G+ ++ Q Sbjct: 515 ARVVLPGGAVDVNQALETLKVMTASMSGEGCVVGIRNLPSSITADQ 560 >SB_39040| Best HMM Match : ChaB (HMM E-Value=4.2) Length = 401 Score = 27.1 bits (57), Expect = 8.0 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -3 Query: 301 DRPIRRASYCYRP*QVGFD-VHYREPEQAFCRLPRHSSQPV 182 DRP RR YCY Q +D + R+ + +PR PV Sbjct: 38 DRPFRRIIYCYAEPQPAYDLMAKRDGGRVPPWVPRERGDPV 78 >SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09) Length = 330 Score = 27.1 bits (57), Expect = 8.0 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +1 Query: 85 QEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 225 + +L+ +G ++ L A + R LCV A CDE ++ LV Sbjct: 70 KSLLQQPCPNGRVILSLAVADLCIGLRLEALCVFAARCDEMTWRVLV 116 >SB_7044| Best HMM Match : PAN (HMM E-Value=1.3e-07) Length = 564 Score = 27.1 bits (57), Expect = 8.0 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 469 GFLIYKLITLHLGINLK 419 GF +YKL LH G+N K Sbjct: 447 GFYVYKLRELHFGVNAK 463 >SB_55065| Best HMM Match : ChaB (HMM E-Value=4.2) Length = 221 Score = 27.1 bits (57), Expect = 8.0 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -3 Query: 301 DRPIRRASYCYRP*QVGFD-VHYREPEQAFCRLPRHSSQPV 182 DRP RR YCY Q +D + R+ + +PR PV Sbjct: 38 DRPFRRIIYCYAEPQPAYDLMAKRDGGRVPPWVPRERGDPV 78 >SB_9070| Best HMM Match : TPR_1 (HMM E-Value=2.7e-39) Length = 278 Score = 27.1 bits (57), Expect = 8.0 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 4/104 (3%) Frame = +1 Query: 115 GGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEW 294 GGL L + KA++ + LC+ + +E +K N + DN + + + Sbjct: 108 GGLYSSLGDNGKAMENYKNALCIFEKLGEE---RKQADVYSNIGAVFKSLGDNGQAMENY 164 Query: 295 A-GLCKIDKDGKARK---IVGCSCVVIKDFGEETPALDVLKDYL 414 LC +K G+ RK + V K G+ A++ K+ L Sbjct: 165 KHALCIYEKFGEERKQADVYSNIGAVFKSLGDNGQAMENYKNAL 208 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,942,315 Number of Sequences: 59808 Number of extensions: 305074 Number of successful extensions: 707 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 707 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1001731762 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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