Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D21
         (284 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126160-1|BAC86466.1|  203|Homo sapiens protein ( Homo sapiens ...    29   2.7  
BC093660-1|AAH93660.1|  931|Homo sapiens transient receptor pote...    27   8.3  
BC093658-1|AAH93658.1|  931|Homo sapiens transient receptor pote...    27   8.3  
AJ271068-1|CAC01686.1|  876|Homo sapiens transient receptor pote...    27   8.3  
AJ271067-1|CAC01685.1|  815|Homo sapiens transient receptor pote...    27   8.3  
AJ271066-1|CAC01684.1|  931|Homo sapiens transient receptor pote...    27   8.3  
AJ006276-1|CAA06943.1|  931|Homo sapiens transient receptor pote...    27   8.3  
AF080394-1|AAC63289.2|  931|Homo sapiens transient receptor pote...    27   8.3  

>AK126160-1|BAC86466.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44172 fis, clone THYMU2036085. ).
          Length = 203

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -1

Query: 251 VYYYLCTKTYNSIY--ILKLIFYKSQLKYC*FKSTL 150
           +++YLC   Y S+Y  +L+ +F    L+ C F S+L
Sbjct: 95  LHFYLCVSVYFSVYLSVLQSVFLFLALRQCLFLSSL 130


>BC093660-1|AAH93660.1|  931|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 6 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = -3

Query: 150 EKEKLVLGSHEDL------MNGVSNFFQPALKSSDVVGVLKRFSFPPRE 22
           EK+  +LGSHEDL         V +  QP+++SS+    L  F+ PPR+
Sbjct: 807 EKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>BC093658-1|AAH93658.1|  931|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 6 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = -3

Query: 150 EKEKLVLGSHEDL------MNGVSNFFQPALKSSDVVGVLKRFSFPPRE 22
           EK+  +LGSHEDL         V +  QP+++SS+    L  F+ PPR+
Sbjct: 807 EKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>AJ271068-1|CAC01686.1|  876|Homo sapiens transient receptor
           potential channel 6, variant delta377-431 protein.
          Length = 876

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = -3

Query: 150 EKEKLVLGSHEDL------MNGVSNFFQPALKSSDVVGVLKRFSFPPRE 22
           EK+  +LGSHEDL         V +  QP+++SS+    L  F+ PPR+
Sbjct: 752 EKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 799


>AJ271067-1|CAC01685.1|  815|Homo sapiens transient receptor
           potential channel 6, variant delta316-431 protein.
          Length = 815

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = -3

Query: 150 EKEKLVLGSHEDL------MNGVSNFFQPALKSSDVVGVLKRFSFPPRE 22
           EK+  +LGSHEDL         V +  QP+++SS+    L  F+ PPR+
Sbjct: 691 EKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 738


>AJ271066-1|CAC01684.1|  931|Homo sapiens transient receptor
           potential channel 6 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = -3

Query: 150 EKEKLVLGSHEDL------MNGVSNFFQPALKSSDVVGVLKRFSFPPRE 22
           EK+  +LGSHEDL         V +  QP+++SS+    L  F+ PPR+
Sbjct: 807 EKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>AJ006276-1|CAA06943.1|  931|Homo sapiens transient receptor
           potential protein protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = -3

Query: 150 EKEKLVLGSHEDL------MNGVSNFFQPALKSSDVVGVLKRFSFPPRE 22
           EK+  +LGSHEDL         V +  QP+++SS+    L  F+ PPR+
Sbjct: 807 EKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


>AF080394-1|AAC63289.2|  931|Homo sapiens transient receptor
           potential protein 6 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = -3

Query: 150 EKEKLVLGSHEDL------MNGVSNFFQPALKSSDVVGVLKRFSFPPRE 22
           EK+  +LGSHEDL         V +  QP+++SS+    L  F+ PPR+
Sbjct: 807 EKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRSSEDFH-LNSFNNPPRQ 854


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,390,000
Number of Sequences: 237096
Number of extensions: 555008
Number of successful extensions: 890
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)