Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D19
(541 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 288 2e-78
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 285 2e-77
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 279 1e-75
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 167 7e-42
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 140 7e-34
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 133 8e-32
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 4e-31
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 130 7e-31
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 129 2e-30
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 4e-30
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 128 4e-30
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 100 7e-22
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 1e-20
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 67 7e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 62 2e-10
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 62 4e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 1e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.001
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 39 0.003
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 3.2
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 4.2
SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7) 28 4.2
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 5.6
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.6
SB_35565| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 27 9.8
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 27 9.8
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 288 bits (706), Expect = 2e-78
Identities = 128/136 (94%), Positives = 133/136 (97%)
Frame = +2
Query: 59 YKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 238
+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGK
Sbjct: 212 FKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 271
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
YVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG NWAKGHYTEGAELVDSVLD
Sbjct: 272 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 331
Query: 419 VVRKESESCDCLQGFQ 466
VVRKE+ESCDCLQGFQ
Sbjct: 332 VVRKEAESCDCLQGFQ 347
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 285 bits (699), Expect = 2e-77
Identities = 128/134 (95%), Positives = 131/134 (97%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG NWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+ESCDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 279 bits (683), Expect = 1e-75
Identities = 122/134 (91%), Positives = 131/134 (97%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+ESCDC+QGFQ
Sbjct: 121 RKEAESCDCIQGFQ 134
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 3e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 340
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 167 bits (405), Expect = 7e-42
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +2
Query: 233 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSV 412
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAG NWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 413 LDVVRKESESCDCLQGFQ 466
LDVVRKE+ESCDC+QGFQ
Sbjct: 62 LDVVRKEAESCDCIQGFQ 79
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 140 bits (339), Expect = 7e-34
Identities = 58/80 (72%), Positives = 71/80 (88%)
Frame = +2
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVD 406
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 407 SVLDVVRKESESCDCLQGFQ 466
++ DV+RKE+E+CDC+QG Q
Sbjct: 71 NIFDVLRKEAENCDCMQGVQ 90
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 133 bits (322), Expect = 8e-32
Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 226
K Y+ RE + I GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 430 KDYEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 489
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVD 406
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD
Sbjct: 490 GAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVD 549
Query: 407 SVLDVVRKESESCDCLQGF 463
VLD +RK ++ C LQGF
Sbjct: 550 LVLDRIRKLADQCTGLQGF 568
Score = 132 bits (318), Expect = 2e-31
Identities = 62/135 (45%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A N+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 419 VVRKESESCDCLQGF 463
+RK ++ C LQGF
Sbjct: 121 RIRKLADQCTGLQGF 135
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 131 bits (316), Expect = 4e-31
Identities = 59/139 (42%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 226
K Y+ RE V I GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 415 KDYEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 474
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVD 406
GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A N+A+GHYT G + +D
Sbjct: 475 GAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHID 534
Query: 407 SVLDVVRKESESCDCLQGF 463
+VLD +RK ++ C LQGF
Sbjct: 535 NVLDRIRKLADQCSGLQGF 553
Score = 109 bits (262), Expect = 1e-24
Identities = 49/120 (40%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +2
Query: 110 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 283
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 284 DSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 463
D VR+G + Q+F P+ + G+ A N+A+GHYT G +L++ VLD +RK ++ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 130 bits (314), Expect = 7e-31
Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 419 VVRKESESCDCLQGF 463
+RK ++ C LQGF
Sbjct: 706 RIRKLADQCTGLQGF 720
Score = 128 bits (310), Expect = 2e-30
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 241
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDV 421
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 422 VRKESESCDCLQGF 463
+RK ++ C LQGF
Sbjct: 186 IRKLADQCTGLQGF 199
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 242 VPRAILVDLEPGTMDSV 292
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 130 bits (313), Expect = 9e-31
Identities = 58/139 (41%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 226
K Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 801 KDYEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 860
Query: 227 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVD 406
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E++D
Sbjct: 861 GAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMID 920
Query: 407 SVLDVVRKESESCDCLQGF 463
VLD +RK ++ C LQGF
Sbjct: 921 LVLDRIRKLADQCTGLQGF 939
Score = 125 bits (302), Expect = 2e-29
Identities = 59/134 (44%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDV 421
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 422 VRKESESCDCLQGF 463
+RK ++ C LQGF
Sbjct: 493 LRKLADGCTGLQGF 506
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 129 bits (311), Expect = 2e-30
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 241
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDV 421
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 422 VRKESESCDCLQGF 463
+RK ++ C LQGF
Sbjct: 121 IRKLADQCTGLQGF 134
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 128 bits (308), Expect = 4e-30
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 419 VVRKESESCDCLQGF 463
+RK ++ C LQGF
Sbjct: 121 RLRKLADGCTGLQGF 135
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 128 bits (308), Expect = 4e-30
Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 419 VVRKESESCDCLQGF 463
RK ++ C LQGF
Sbjct: 121 RCRKLADQCTGLQGF 135
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 100 bits (240), Expect = 7e-22
Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP + P+ + G+ A N+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 419 VVRKESESCDCLQGF 463
+RK ++ C LQGF
Sbjct: 111 RLRKLADQCSGLQGF 125
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 96.3 bits (229), Expect = 1e-20
Identities = 40/82 (48%), Positives = 59/82 (71%)
Frame = +2
Query: 218 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAE 397
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A N+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 398 LVDSVLDVVRKESESCDCLQGF 463
+V+ V+D +RK ++ C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 95.1 bits (226), Expect = 3e-20
Identities = 39/89 (43%), Positives = 58/89 (65%)
Frame = +2
Query: 197 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKG 376
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A N+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 377 HYTEGAELVDSVLDVVRKESESCDCLQGF 463
HYT G E +D LD +RK ++ C LQGF
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGF 100
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 8e-13
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 238
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 239 YVPRAILVDLEPGTMDSVR 295
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +2
Query: 284 DSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 463
D VR+G + Q+F P+ + G+ A N+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 67.3 bits (157), Expect = 7e-12
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2
Query: 290 VRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 463
VR+G + Q+F P+ + G+ A N+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 62.5 bits (145), Expect = 2e-10
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +2
Query: 74 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 235
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 236 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGXNWAKGHYTEGAELVD 406
RA+ +D+E + S G P F Q G+G NWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 407 SVLDVVRKESESCDCLQGF 463
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +2
Query: 344 QSGAGXNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 466
Q+ A NWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 290 VRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 463
+R+G + Q+F P+ + G+ A N+A+GHYT G E +D LD +RK ++ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 290 VRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVVRK 430
VR+G + Q+F P+ + G+ A N+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 290 VRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVVRK 430
VR G + +F PD + G+ A N+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 232
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 233 GKY 241
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 122 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 223
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Frame = +2
Query: 83 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 262
+ GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 263 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGXNWAKGHYTE-----GAELVDSVLDV 421
D E + S R G GQ R N + G+ G G N+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 422 VRKESESCDCLQG 460
+RKE E CD G
Sbjct: 104 MRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 248 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNW 367
RA+L+D+E G ++++ GP +F + SG G NW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 309 PKGPERTESMVPGSRSTRMARGTYLP--PEA 223
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 422 VRKESESCDCLQGFQ 466
+RKE+E CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 354 APDCPKTKLSGRNICPKGPERTESMVPGSRST 259
A DCP ++ +GR +CP P +S + ++++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7)
Length = 481
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 277 AGLEVDEDGAGHVL-ASGGLIVINIDALKLQVRIAVVCTG-GVDAVLVGDDLPEFGSDLV 104
A + V+ D A V+ V+++ A+ + V A V VDAV+V ++ D
Sbjct: 229 AAVVVNVDAAAVVVNVDAAAAVVDVAAVVVDVDAAAVFVNVNVDAVIVNVEVAAVVVDCE 288
Query: 103 TALAGLNVHD 74
A+A +N HD
Sbjct: 289 VAVAVVNAHD 298
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 235
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 236 KYVPRAILVDLE 271
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 134 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 274
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_35565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 356 RRRTVRKQSCQGGISVRKVPNE 291
RRRT K+ CQG I V + P +
Sbjct: 481 RRRTCNKKDCQGQIHVERSPKD 502
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 179 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSV 292
D+D ++ + VYYN +S G+ + ++ LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILCKS-LVDKIPDALQRV 43
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 378 CPLAQLXPAPDCPKTKLSGRNICP 307
CPL ++ P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 378 CPLAQLXPAPDCPKTKLSGRNICPKGPERTESMVPGSR 265
CPL ++ AP CP ++ +CP + P R
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCPLKEMLDTTYAPSKR 209
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 366 QLXPAPDCPKTKLSGRNICPKGPERTESMVPGSRSTR 256
Q PA KT LS R K E+T S PG+R+TR
Sbjct: 50 QEVPANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,302,189
Number of Sequences: 59808
Number of extensions: 298176
Number of successful extensions: 926
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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