Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D19
(541 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 266 5e-72
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 263 5e-71
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 263 5e-71
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 262 1e-70
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 261 2e-70
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 261 2e-70
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 260 4e-70
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 259 7e-70
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 259 1e-69
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 133 6e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 133 6e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 131 3e-31
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 130 6e-31
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 130 6e-31
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 128 3e-30
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 128 3e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 109 2e-24
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 108 2e-24
At4g37190.1 68417.m05265 expressed protein 34 0.070
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 1.5
At1g49570.1 68414.m05558 peroxidase, putative identical to perox... 29 2.6
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 28 3.5
At1g17210.1 68414.m02097 expressed protein distantly related to ... 28 3.5
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 23 4.1
At3g48310.1 68416.m05272 cytochrome P450 71A22, putative (CYP71A... 28 4.6
At2g23080.2 68415.m02751 casein kinase II alpha chain, putative ... 28 4.6
At2g23080.1 68415.m02752 casein kinase II alpha chain, putative ... 28 4.6
At5g01050.1 68418.m00008 laccase family protein / diphenol oxida... 27 6.1
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 6.1
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 8.0
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 8.0
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 266 bits (653), Expect = 5e-72
Identities = 115/135 (85%), Positives = 130/135 (96%), Gaps = 1/135 (0%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 241
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDV 421
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 422 VRKESESCDCLQGFQ 466
VRKE+E+CDCLQGFQ
Sbjct: 121 VRKEAENCDCLQGFQ 135
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (645), Expect = 5e-71
Identities = 114/134 (85%), Positives = 128/134 (95%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+E+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (645), Expect = 5e-71
Identities = 116/135 (85%), Positives = 128/135 (94%), Gaps = 1/135 (0%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 241
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 242 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDV 421
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 422 VRKESESCDCLQGFQ 466
VRKE+E+CDCLQGFQ
Sbjct: 121 VRKEAENCDCLQGFQ 135
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 262 bits (641), Expect = 1e-70
Identities = 116/134 (86%), Positives = 126/134 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+E+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (640), Expect = 2e-70
Identities = 114/134 (85%), Positives = 126/134 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAG NWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+E+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (640), Expect = 2e-70
Identities = 114/134 (85%), Positives = 126/134 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAG NWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+E+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 260 bits (637), Expect = 4e-70
Identities = 116/134 (86%), Positives = 126/134 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+E+ DCLQGFQ
Sbjct: 121 RKEAENSDCLQGFQ 134
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 259 bits (635), Expect = 7e-70
Identities = 113/134 (84%), Positives = 127/134 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+E+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 259 bits (634), Expect = 1e-69
Identities = 112/134 (83%), Positives = 126/134 (94%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 244
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 245 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLDVV 424
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAG NWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 425 RKESESCDCLQGFQ 466
RKE+E+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 133 bits (322), Expect = 6e-32
Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 419 VVRKESESCDCLQGF 463
VRK +++C LQGF
Sbjct: 121 RVRKLADNCTGLQGF 135
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 133 bits (322), Expect = 6e-32
Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 419 VVRKESESCDCLQGF 463
VRK +++C LQGF
Sbjct: 121 RVRKLADNCTGLQGF 135
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 131 bits (317), Expect = 3e-31
Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 419 VVRKESESCDCLQGF 463
+RK +++C LQGF
Sbjct: 121 RLRKLADNCTGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 130 bits (314), Expect = 6e-31
Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKESESCDCLQGF 463
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 130 bits (314), Expect = 6e-31
Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKESESCDCLQGF 463
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 128 bits (308), Expect = 3e-30
Identities = 59/135 (43%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKESESCDCLQGF 463
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 128 bits (308), Expect = 3e-30
Identities = 59/135 (43%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 238
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 239 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGXNWAKGHYTEGAELVDSVLD 418
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A N+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 419 VVRKESESCDCLQGF 463
+RK +++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 109 bits (261), Expect = 2e-24
Identities = 48/134 (35%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 247
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 248 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGXNWAKGHYTEGAELVDSVLDV 421
RA+L+DLEP ++ +++G + ++ +N GAG NWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 422 VRKESESCDCLQGF 463
+ +E++ D L+GF
Sbjct: 122 IDREADGSDSLEGF 135
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 108 bits (260), Expect = 2e-24
Identities = 48/134 (35%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +2
Query: 68 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 247
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 248 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGXNWAKGHYTEGAELVDSVLDV 421
RA+L+DLEP ++ +++G + ++ +N GAG NWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 422 VRKESESCDCLQGF 463
+ +E++ D L+GF
Sbjct: 122 IDREADGSDSLEGF 135
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.070
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 65 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 232
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 233 GKYVPRAILVDLEP--GTMDS 289
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2
Query: 398 LVDSVLDVVRKESESCDCLQGF 463
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g49570.1 68414.m05558 peroxidase, putative identical to
peroxidase ATP5a [Arabidopsis thaliana]
gi|1546702|emb|CAA67341; similar to peroxidase
SWISS-PROT:P80679 from [Armoracia rusticana]
Length = 350
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 307 ERSRTNRVHGAGLEVDEDGAGHVLASGGLIVINIDALKLQVRIAVVCTGG 158
+ ++ NR G EV ED + +S L V D + L R AVV TGG
Sbjct: 111 KNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGG 160
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 357 PAPDCPKTKLSGRNICPKGPERTESMVPG-SRSTRMARGT 241
PAP P L NICP G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 28.3 bits (60), Expect = 3.5
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Frame = -2
Query: 348 DCPK-TKLSGRNICPKGPERTESMV--PG------SRSTRMARGTY--LPPE 226
DC + + S RN CP GP R +S + PG S S+R A G Y L PE
Sbjct: 280 DCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQFSASSRKASGNYEVLGPE 331
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 23.4 bits (48), Expect(2) = 4.1
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 286 VHGAGLEVDEDGAG-HVLASGGLIVINIDA 200
+ G G+ VD GAG H+ A ++I A
Sbjct: 176 IEGTGVFVDGPGAGKHIQAGASKVIITAPA 205
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 127 PEFGSDLVTALAGLNVHDFPHFVFFIL 47
P G+D+ T + G+N D+ H V I+
Sbjct: 204 PAKGADIPTYVMGVNEQDYGHDVANII 230
>At3g48310.1 68416.m05272 cytochrome P450 71A22, putative (CYP71A22)
Identical to Cytochrome P450 71A22
(SP:Q9STL1)[Arabidopsis thaliana]
Length = 490
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 539 LFTDL*DKVMCPYRSRYRLRESV*VGILVNNHMIRILFGLRQE 411
+F + D + PY +R +SV V L+ N M+R +RQE
Sbjct: 108 IFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQE 150
>At2g23080.2 68415.m02751 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 307
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 163
KK K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At2g23080.1 68415.m02752 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 333
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 53 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 163
KK K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At5g01050.1 68418.m00008 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 586
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -2
Query: 279 VPGSRSTRMARGTYLPPEASL**TLMRSSCKSESPWYAPVGSMPCSSEMISQNLAPIWLP 100
VP S T+ RG + A+ SS PW P +P + S + + P
Sbjct: 289 VPASPDTKPTRGLIVYEGAT-------SSSSPTKPWMPPANDIPTAHRFSSNITSLVGGP 341
Query: 99 HW 94
HW
Sbjct: 342 HW 343
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 71 EIVHIQAGQCGNQIGAKFWEIISD 142
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 113 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 262
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 86 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 178
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,550,990
Number of Sequences: 28952
Number of extensions: 206852
Number of successful extensions: 666
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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