Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D18
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   2.0  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   6.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.0  
EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.        23   7.9  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 255 RFQSSQLSTQAIRQPSRPWWEVNVS*R*AILKLGEMMINL 136
           R  + Q+ T A   P RP+W V +    A  KL    ++L
Sbjct: 29  RIWNIQMETPADHNPERPFWVVGLQNDEAARKLASRSMSL 68


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 338 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 228
           A+PD F    S  P    + +S     ++   P +PP
Sbjct: 370 AHPDHFLDHRSPSPQRGNQSLSQMTEILEAIQPEFPP 406


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 423 MIDHVHSVCGSHGQYGEEEKHESFHCRIVSEKKLKNL 533
           M+  +  + G  G Y   +K + F  R +    +KNL
Sbjct: 676 MMAGIEDIVGKTGNYNIRDKFKRFDNRFIRPLLIKNL 712


>EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 510 TLFDNESFRVFLLRRIGHGCRKQS 439
           TLFD E F VF   +   G  KQS
Sbjct: 319 TLFDREGFAVFRDHKSMLGALKQS 342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,336
Number of Sequences: 2352
Number of extensions: 12318
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)