Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D17
(376 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 35 0.019
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.057
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 33 0.075
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 33 0.075
SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.23
SB_605| Best HMM Match : Calx-beta (HMM E-Value=0) 31 0.30
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 31 0.40
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 28 2.8
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_9402| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_4276| Best HMM Match : DUF288 (HMM E-Value=1e-04) 27 6.5
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 26 8.7
SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11) 26 8.7
SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10) 26 8.7
SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 26 8.7
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 26 8.7
SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20) 26 8.7
SB_4456| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_3622| Best HMM Match : K167R (HMM E-Value=1.5) 26 8.7
SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14) 26 8.7
SB_50013| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_45353| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_42441| Best HMM Match : DUF1484 (HMM E-Value=0.48) 26 8.7
SB_39096| Best HMM Match : Exo_endo_phos (HMM E-Value=4.6e-10) 26 8.7
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 37.5 bits (83), Expect = 0.004
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 7 SPQARTAFTNSALLLAEQYGFDGIDLSWQLP 99
S RT F +S L L+++Y FDG DL W+ P
Sbjct: 493 SKSNRTTFISSLLQLSDKYDFDGFDLDWEYP 523
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 35.1 bits (77), Expect = 0.019
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 13 QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSF 141
+ R F SA+ +GFDG+DL W+ P + +S G F
Sbjct: 117 EKRAIFIKSAIETLRTHGFDGLDLDWEYPGMRGGSPKSDKGRF 159
Score = 33.5 bits (73), Expect = 0.057
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 13 QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSF 141
+ R F SA+ GFDG+DL W+ P + +S G F
Sbjct: 502 EKRAIFIKSAIETLRTNGFDGLDLDWEYPGMRGGSPKSDKGRF 544
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 33.5 bits (73), Expect = 0.057
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 178 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 327
+DDK++E +E FT V + + PN ++VI++L N + SI F V S+
Sbjct: 703 LDDKKNEPQETFTVTVSSADSNIEISPN-EVVITILDN-DVSIGFMVTSV 750
Score = 29.5 bits (63), Expect = 0.93
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 178 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 327
+DDKE E E FT + + +NVKP + + N ++SI F++ ++
Sbjct: 2157 IDDKEIEDLEAFTVTLSSDDKRVNVKPETG-TVKITDN-DASIGFELATV 2204
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +1
Query: 154 KKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIIN 333
+KT DD++ E E FT + M + KP+ ++++ N ++++ F V S++
Sbjct: 5260 RKTIQIPITDDQKVEGDESFTVAITSMNPNVMTKPD-TATVTIIDN-DATVGF-VESLVV 5316
Query: 334 LVDI 345
L D+
Sbjct: 5317 LEDV 5320
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 33.1 bits (72), Expect = 0.075
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 16 ARTAFTNSALLLAEQYGFDGIDLSWQLP 99
+R F +S++ + Q+ FDG DL W+ P
Sbjct: 227 SRKVFIDSSIAMLRQWNFDGFDLDWEYP 254
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 33.1 bits (72), Expect = 0.075
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 1 LESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 99
+++ R F +S + + +GFDG+DL W+ P
Sbjct: 110 VKTAATRKVFIDSVIRILRTWGFDGLDLDWEYP 142
>SB_20016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 31.5 bits (68), Expect = 0.23
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = -3
Query: 299 LFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLS---STGVVP-NVFLMLCQKDP 132
++TFG + +C G+T C I++ + V PSL + + T VP + ++ C K
Sbjct: 290 IYTFGNETVCDCNPGYTGQRCTINK-QCVVPSLNTGEIGGKYETERVPGSKMVLFCNKG- 347
Query: 131 ILERIFFGFLFGNCQDRSIPSKPYCS 54
I + FG C D S S PY S
Sbjct: 348 ----ISLSWRFGVCVDGS--SSPYWS 367
>SB_605| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 1958
Score = 31.1 bits (67), Expect = 0.30
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 157 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 327
K F +DD E+ E F + + V P++ V V+ + ++ I FDVPSI
Sbjct: 950 KDFVIALIDDDVVENPEKFAVVFSTDDPRVTVDPSIPFVTVVITDNDAMIGFDVPSI 1006
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 30.7 bits (66), Expect = 0.40
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 19 RTAFTNSALLLAEQYGFDGIDLSWQLP 99
R F + A+L + FDG+DL W+ P
Sbjct: 116 RKIFIDDAILFLRNHMFDGLDLDWEYP 142
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 30.7 bits (66), Expect = 0.40
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 19 RTAFTNSALLLAEQYGFDGIDLSWQLP 99
R F + A+L + FDG+DL W+ P
Sbjct: 40 RKIFIDDAILFLRNHMFDGLDLDWEYP 66
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 175 PVDDKESEHREGFTALVREM 234
P DDK +E R FT+L++EM
Sbjct: 1066 PEDDKPAEQRMSFTSLLKEM 1085
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.9 bits (59), Expect = 2.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 151 IKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIY 309
+KK F + V EH+ GF + A + K +++LV S P + +SIY
Sbjct: 306 LKKPFKQSEVVKNTKEHQNGFPFVAATTSGAAHWKTSVELVNS--PALGTSIY 356
>SB_9402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 26.6 bits (56), Expect = 6.5
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Frame = +1
Query: 199 HREGFTALVREMKQALNVKPNMQLVISVLP---------NVNSSIYFDVPSIINLVDIVN 351
H +GF A R K VK ++ ++ L ++NS+ +FDV + + ++N
Sbjct: 17 HYDGFAA--RRQKMLGQVKTVLEYLLQALKERDNMFDFEHINSATFFDVKTSNTVEVLLN 74
Query: 352 IQAFD 366
+Q FD
Sbjct: 75 VQGFD 79
>SB_4276| Best HMM Match : DUF288 (HMM E-Value=1e-04)
Length = 687
Score = 26.6 bits (56), Expect = 6.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 76 IDLSWQLPKRKPKKIRSSIGSFWHSIKKTFGTTPVDD-KESEHREGFTALV 225
+DL W K KPK +S + W I T P DD K+ +G+ +V
Sbjct: 143 VDLDWSSIKMKPKPEKSEMNDKWVVI--TTINYPTDDVKKLAKMDGWKVVV 191
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSI 107
>SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11)
Length = 1175
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSI 107
>SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10)
Length = 549
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSI 107
>SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 903
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSI 107
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 387 LRKALNVKPNTSTVFKALEYVDLSI 411
>SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 187 LRKALNVKPNTSTVFKALEYVDLSI 211
>SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20)
Length = 1285
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 766 LRKALNVKPNTSTVFKALEYVDLSI 790
>SB_4456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 477 LRKALNVKPNTSTVFKALEYVDLSI 501
>SB_3622| Best HMM Match : K167R (HMM E-Value=1.5)
Length = 441
Score = 26.2 bits (55), Expect = 8.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 366 VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLFHLTYKSGEAF 205
+ C DV+ V + + V VNG QNA+ + + F + FH K +AF
Sbjct: 268 IVCQDVEEVKSILETEAVNVNG-----QNAEGFVPLEFAVMLGFHHIAKMLQAF 316
>SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14)
Length = 624
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 324 LRKALNVKPNTSTVFKALEYVDLSI 348
>SB_50013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +1
Query: 226 REMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFD 366
+E+K AL + +++++ V + N + +VP++ N VD++ QAFD
Sbjct: 27 KEVKYALALM-FVEILVPVAASANREL--NVPALKNFVDMMYHQAFD 70
>SB_45353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSI 107
>SB_42441| Best HMM Match : DUF1484 (HMM E-Value=0.48)
Length = 776
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +1
Query: 226 REMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFD 366
+E+K AL + +++++ V + N + +VP++ N VD++ QAFD
Sbjct: 279 KEVKYALALM-FVEILVPVAASANREL--NVPALKNFVDMMYHQAFD 322
>SB_39096| Best HMM Match : Exo_endo_phos (HMM E-Value=4.6e-10)
Length = 279
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 232 MKQALNVKPNMQLVISVLPNVNSSI 306
+++ALNVKPN V L V+ SI
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSI 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,977,245
Number of Sequences: 59808
Number of extensions: 186158
Number of successful extensions: 622
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 619783250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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