SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D15
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.77 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 505 LNSYVCLCKP 534
           +NSY+C CKP
Sbjct: 42  INSYICTCKP 51


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 273 LNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTSGGDSKK 410
           L R+K+ K+  K      +K      +  +  +KK ++  G D+ K
Sbjct: 230 LRRQKRFKDEKKELIRQTHKSPSHSVDNSNSSEKKSSIQHGDDAHK 275


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 234 PIPFCFVPRLLLVYPTTTWP 175
           P+P  + P+L  +  + TWP
Sbjct: 264 PLPEAYFPKLDSLVASRTWP 283


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 213 PRLLLVYPTTTWPWWSRSVP 154
           P   LV  ++  PWW R  P
Sbjct: 61  PNENLVVTSSNRPWWERYQP 80


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 213 PRLLLVYPTTTWPWWSRSVP 154
           P   LV  ++  PWW R  P
Sbjct: 62  PNENLVVTSSNRPWWERYQP 81


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 213 PRLLLVYPTTTWPWWSRSVP 154
           P   LV  ++  PWW R  P
Sbjct: 62  PNENLVVTSSNRPWWERYQP 81


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 264  EKELNREKKDKEAVKSQAE 320
            +KEL  EKK  E  K +A+
Sbjct: 1070 KKELEEEKKQAEEAKRKAK 1088



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 409 FLESPPLVTVNFF 371
           F ESPP+V +N F
Sbjct: 446 FFESPPVVFLNDF 458


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 264  EKELNREKKDKEAVKSQAE 320
            +KEL  EKK  E  K +A+
Sbjct: 1070 KKELEEEKKQAEEAKRKAK 1088



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 409 FLESPPLVTVNFF 371
           F ESPP+V +N F
Sbjct: 446 FFESPPVVFLNDF 458


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 264  EKELNREKKDKEAVKSQAE 320
            +KEL  EKK  E  K +A+
Sbjct: 1070 KKELEEEKKQAEEAKRKAK 1088



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 409 FLESPPLVTVNFF 371
           F ESPP+V +N F
Sbjct: 446 FFESPPVVFLNDF 458


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 264  EKELNREKKDKEAVKSQAE 320
            +KEL  EKK  E  K +A+
Sbjct: 1070 KKELEEEKKQAEEAKRKAK 1088



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 409 FLESPPLVTVNFF 371
           F ESPP+V +N F
Sbjct: 446 FFESPPVVFLNDF 458


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 189  TTTWPWWS 166
            TTT PWW+
Sbjct: 1046 TTTSPWWT 1053


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,879
Number of Sequences: 336
Number of extensions: 2762
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -