Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D15
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0677 + 12859101-12859413,12862450-12862817 44 1e-04
01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33... 39 0.004
04_01_0256 + 3402982-3402984,3403077-3403158,3403307-3403449,340... 37 0.017
03_06_0676 - 35460281-35460648,35462097-35462382 35 0.070
04_01_0227 - 2877303-2877659,2877755-2877897,2878102-2878183,287... 34 0.12
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 33 0.28
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 32 0.37
05_01_0146 - 953957-956278,956468-956786,957185-957213 31 1.1
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 31 1.1
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 30 1.5
02_03_0387 - 18412064-18412144,18412280-18412361,18412922-184131... 30 2.0
11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,778... 29 3.5
09_04_0153 + 15179064-15179210,15179598-15179668,15179831-151800... 29 3.5
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 28 6.1
02_04_0290 - 21627733-21628353,21628424-21628663,21628874-216292... 28 6.1
01_06_1261 - 35826513-35828941,35829201-35829294 28 6.1
02_05_0577 - 30100084-30100251,30100474-30100548,30100631-301007... 28 8.0
>02_02_0677 + 12859101-12859413,12862450-12862817
Length = 226
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 51 ISGFALFLLVVIRRLVQMISELAMLLAQAEA---NYRQAQSATTTARSLLDKXXXXXXXX 221
+ G++LFL +VI RL Q I EL L EA + + + A K
Sbjct: 103 LMGYSLFLALVIDRLHQYIRELRGLKKNVEAVTKHNKMLEEAKHGRSEETKKYQEEIGAL 162
Query: 222 XXXXXXXRTQILNLEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 380
+ Q+ +E++ + A++ Q+ESL EYDRL E++ L+++L
Sbjct: 163 NEDMKKLKLQVQEKTEEVHVAEDKALAIRKQSESLLLEYDRLLEDNQHLREQL 215
>01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-336498,
336577-336734,337180-337310,337385-337472,337587-337690,
338346-338444,339060-339116,339262-339337,339519-339602,
339969-340010,340128-340198,341516-341564,342370-342441,
343149-343286,343393-343473,344166-344353,344591-345188,
345274-345342,346729-346854,347048-347175,347986-348142,
348342-348388,348472-348535,348691-348765,349292-349414,
349797-349982,351179-351303,351390-351459,351974-352101,
352585-352726,353065-353163,353239-353285,353598-353652,
353758-353967,354686-354757,354836-354905,355231-355414,
355521-355644,355732-355863,356252-356317,356805-356852,
357572-357676,357728-357865,358097-358399,358482-358594,
359082-359148,359236-359310,359395-359517,359610-359618,
360156-360320,360401-360502,361545-361696,361794-361995,
362079-362126,362215-362298,362613-362657,363302-363385,
363890-363970,364044-364133,364217-364279,364824-364841,
365238-365378,365494-365550,366091-366185,366275-366383,
367067-367156,367308-367387,367480-367558,367742-367903,
368005-368136,368335-368469,368553-368618,369317-369457,
369575-369648,369685-369910
Length = 2905
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 552 AIYDSWVLTVCFANSIV*R-PLSVTCCVIISNCRGLHNYNCLTDT 683
A+Y +W +C S + R PL CC I+S N NC T+T
Sbjct: 1266 ALYSTWFYIICIVGSYIQRQPLQDQCCNILSKLLAAFNSNCSTET 1310
>04_01_0256 +
3402982-3402984,3403077-3403158,3403307-3403449,
3403557-3403832,3404136-3404315
Length = 227
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 264 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 380
E+E R K+DKE + + ++ KE RL EE+ KLQ+K+
Sbjct: 122 EEEQKRLKRDKENLNLKVDTKRKENRRLEEENKKLQRKI 160
>03_06_0676 - 35460281-35460648,35462097-35462382
Length = 217
Score = 34.7 bits (76), Expect = 0.070
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Frame = +3
Query: 57 GFALFLLVVIRRLVQMISELAMLLAQAEANYRQAQSATTTARSLLDKXXXXXXXXXXXXX 236
GF LFL VI RL + +L L A + + + R +K
Sbjct: 96 GFTLFLAFVIDRLHHYLRKLITLRKAANTSREEVEKLQMENRLFREKEEKSSSEIKKLHQ 155
Query: 237 XXRTQILNLEKELNREKKDKE-----------AVKSQAESLNKEYDRLAEEHSKLQKKL 380
++ K+L E +D E A++ Q+E L EYDRL E++ LQ +L
Sbjct: 156 EI-AKLNESMKKLKSESEDHERKVLEAEAHVNALQKQSEELLLEYDRLLEDNQILQSQL 213
>04_01_0227 -
2877303-2877659,2877755-2877897,2878102-2878183,
2878289-2878291
Length = 194
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 264 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 380
++EL K++KE + ++ E+ +E RL EE+ KLQ+K+
Sbjct: 143 KEELKITKREKEYLNTKLETKREENKRLDEENKKLQRKI 181
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/48 (29%), Positives = 32/48 (66%)
Frame = +3
Query: 246 TQILNLEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVT 389
T++ + ++ L + +++ +++S ESL +E + + EEH +L++K T T
Sbjct: 375 TELDDAKEMLQKVAEEESSLRSLVESLKQELEAVKEEHDQLKQKDTET 422
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 105 ISELAMLLAQAEANYRQAQSATTTARSLLDKXXXXXXXXXXXXXXXRTQILNLEKELNRE 284
+ E+ + +A+ + + A TT RS +D I LE ELNR
Sbjct: 457 LEEVRANIEKAKNEAKLFKLAATTLRSEMDNEKSSLVELQQREGMASIAICALEAELNRT 516
Query: 285 KKDKEAVKSQAESLNK---EYDRLAEE 356
K++ E VKS+ E + E R+ +E
Sbjct: 517 KQEIEYVKSKEEDAQERMVELPRILQE 543
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 252 ILNLEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKK 377
I L + +RE+K+K AV+ +L++E D+ E H + K
Sbjct: 484 ISELNETRDREEKEKRAVEDLTAALSEESDKAKEAHERYLSK 525
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 264 EKELNREKK-DKEAVKSQAE-SLNKEYDRLAEEHSKLQ 371
EK+ ++EKK DKEA K + E + NKE+D+L E Q
Sbjct: 491 EKDKHKEKKRDKEAKKEKDEQNNNKEHDKLRENSINYQ 528
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 243 RTQILNLEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKK 377
+ +IL L KEL+ ++ + +S+ +L K+YD L +E+ L +K
Sbjct: 1979 KIEILGLCKELSGLRQSYQTSQSEICNLTKKYDSLLQEYKVLVEK 2023
>02_03_0387 -
18412064-18412144,18412280-18412361,18412922-18413142,
18413387-18413745,18413834-18414443,18414546-18414605,
18414685-18414751,18414843-18414936,18415012-18415125,
18415242-18415308,18415386-18415551,18416587-18417080
Length = 804
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 264 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTSGGDSKKDE 416
E++ RE+KD++ KS+ +KE + K + K GGD K E
Sbjct: 87 ERDKERERKDRDKEKSRGRDKSKEEREDKDYRDKSRGKDRGDDGGDLSKGE 137
>11_02_0051 +
7776312-7780228,7780627-7780695,7781920-7781979,
7782225-7782324,7782720-7782801,7782928-7782940,
7783621-7783681
Length = 1433
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 72 LLVVIRRLVQMISELAMLLAQAEANYRQAQSATTTARSL 188
LL RRL++ ++EL +L +A+ +R+ SA TTA ++
Sbjct: 117 LLPANRRLLRKLTELKNILVEAKNFHREFLSAGTTAAAI 155
>09_04_0153 +
15179064-15179210,15179598-15179668,15179831-15180017,
15180107-15180298
Length = 198
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 243 RTQILNLEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTSGGDSKK 410
R ++ L ++ KD E + + ES+NK L E LQKKL DS++
Sbjct: 34 RDRLDELRRDYRDVLKDNEMKRRKLESINKRKLVLLSEVKFLQKKLNSFKKNDSQQ 89
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 261 LEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTSGGDSK 407
L EL + KK+ + + + LN + AEE +++ + L GGD+K
Sbjct: 458 LNDELQKVKKEHDTLLKSSVELNDNLTKTAEERNQILECLK-EKGGDNK 505
>02_04_0290 -
21627733-21628353,21628424-21628663,21628874-21629214,
21630934-21631612,21631893-21631962,21632063-21632190
Length = 692
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 285 KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTSGG 398
KKD +K + ES+ +Y L E LQK++ GG
Sbjct: 587 KKDINTLKFELESMKAKYLELQHEMDALQKQVDGRGGG 624
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 270 ELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 380
++NR K + + ++ + +SL E L E+ SKL ++L
Sbjct: 351 QINRMKNEADELQKRLDSLEDEKAALIEDSSKLSERL 387
>02_05_0577 -
30100084-30100251,30100474-30100548,30100631-30100755,
30101538-30101609,30102016-30102108,30102333-30102419,
30103049-30103135,30103448-30103522,30104142-30104238
Length = 292
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 258 NLEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTSGGDSKKDE 416
NLE R K + + S +ESL + E K Q TVT G D K +
Sbjct: 102 NLENIKRRTKMAQSRLVSDSESLKNANLQNNETMKKEQSGTTVTQGADRTKSQ 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,540,594
Number of Sequences: 37544
Number of extensions: 255743
Number of successful extensions: 688
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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