Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D15
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    25   0.51 
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    25   0.51 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    25   0.90 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.1  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   4.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.4  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 264 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTS 392
           E+E N  K +KE  K +  S  +  D+   E SK +K ++  S
Sbjct: 44  EREQNSYKNEKEYRKYRERSKERSRDKRERERSKERKIISSLS 86


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 264 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTS 392
           E+E N  K +KE  K +  S  +  D+   E SK +K ++  S
Sbjct: 44  EREQNSYKNEKEYRKYRERSKERSRDKRERERSKERKIISSLS 86


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 264 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTS 392
           E+E N  K +KE  K +  S  +  DR   E S+  K ++  S
Sbjct: 44  EREQNSYKNEKEYRKYRETSKERSRDRTERERSREPKIISSLS 86


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 255 KFVFLTLPIPFCFVPRLLLVYPTTTWPW 172
           +F+    PIP  + P+L  +  + TWP+
Sbjct: 259 RFINWHEPIPEAYFPKLDSLVASRTWPF 286


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 264 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLTVTS 392
           E+E    K ++E  K    S  +  DR+  E SK  K ++  S
Sbjct: 266 EREQKSYKNEREYRKYGKTSKERSRDRMERERSKEPKIISSLS 308


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 252 FVFLTLPIPFCFVPRLLLVYPTTTWPWWSRS 160
           F  L L  PF  V    ++ P  TW  W  S
Sbjct: 322 FFILYLATPFVPVEPPDILMPALTWLGWINS 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,197
Number of Sequences: 438
Number of extensions: 3287
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)