Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D14
         (90 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R...    51   6e-06
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary...    51   6e-06
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ...    41   0.006
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ...    37   0.075
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary...    34   0.53 

>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5;
          Eukaryota|Rep: Ribosomal protein S16 - Ixodes
          scapularis (Black-legged tick) (Deer tick)
          Length = 148

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +3

Query: 6  REPIQAVQVFGRKKTATAVAYCKRGHGV 89
          +E IQ+VQV GRKKTATAVAYCKRG+G+
Sbjct: 6  KEAIQSVQVLGRKKTATAVAYCKRGNGL 33


>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
          Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
          (Human)
          Length = 146

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +3

Query: 12 PIQAVQVFGRKKTATAVAYCKRGHGV 89
          P+Q+VQVFGRKKTATAVA+CKRG+G+
Sbjct: 6  PLQSVQVFGRKKTATAVAHCKRGNGL 31


>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
          Oryza sativa (japonica cultivar-group)|Rep: Putative
          uncharacterized protein - Oryza sativa subsp. japonica
          (Rice)
          Length = 61

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +3

Query: 6  REPIQAVQVFGRKKTATAVAYCKRGHGV 89
          R P   VQ FGRKKTA AV+YCK G G+
Sbjct: 7  RPPPGTVQCFGRKKTAVAVSYCKPGRGL 34


>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
          Ustilago maydis|Rep: Putative uncharacterized protein -
          Ustilago maydis (Smut fungus)
          Length = 199

 Score = 37.1 bits (82), Expect = 0.075
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +3

Query: 21 AVQVFGRKKTATAVAYCKRGHGV 89
          +V  FG+KKTATAVA+CK G G+
Sbjct: 5  SVSCFGKKKTATAVAHCKEGKGL 27


>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
          Eukaryota|Rep: 40S ribosomal protein S16 -
          Saccharomyces cerevisiae (Baker's yeast)
          Length = 143

 Score = 34.3 bits (75), Expect = 0.53
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +3

Query: 15 IQAVQVFGRKKTATAVAYCKRGHGV 89
          + +VQ FG+KK+ATAVA+ K G G+
Sbjct: 4  VPSVQTFGKKKSATAVAHVKAGKGL 28


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,992,517
Number of Sequences: 1657284
Number of extensions: 706351
Number of successful extensions: 1884
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 575,637,011
effective HSP length: 11
effective length of database: 557,406,887
effective search space used: 10033323966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)