Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D14
         (90 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.                  51   8e-07
BC071674-1|AAH71674.1|  152|Homo sapiens RPS16 protein protein.        51   8e-07
BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16 p...    51   8e-07
BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16 p...    51   8e-07
AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16 p...    51   8e-07

>M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.
          Length = 146

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +3

Query: 12 PIQAVQVFGRKKTATAVAYCKRGHGV 89
          P+Q+VQVFGRKKTATAVA+CKRG+G+
Sbjct: 6  PLQSVQVFGRKKTATAVAHCKRGNGL 31


>BC071674-1|AAH71674.1|  152|Homo sapiens RPS16 protein protein.
          Length = 152

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +3

Query: 12 PIQAVQVFGRKKTATAVAYCKRGHGV 89
          P+Q+VQVFGRKKTATAVA+CKRG+G+
Sbjct: 6  PLQSVQVFGRKKTATAVAHCKRGNGL 31


>BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16
          protein.
          Length = 146

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +3

Query: 12 PIQAVQVFGRKKTATAVAYCKRGHGV 89
          P+Q+VQVFGRKKTATAVA+CKRG+G+
Sbjct: 6  PLQSVQVFGRKKTATAVAHCKRGNGL 31


>BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16
          protein.
          Length = 146

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +3

Query: 12 PIQAVQVFGRKKTATAVAYCKRGHGV 89
          P+Q+VQVFGRKKTATAVA+CKRG+G+
Sbjct: 6  PLQSVQVFGRKKTATAVAHCKRGNGL 31


>AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16
          protein.
          Length = 146

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 21/26 (80%), Positives = 26/26 (100%)
 Frame = +3

Query: 12 PIQAVQVFGRKKTATAVAYCKRGHGV 89
          P+Q+VQVFGRKKTATAVA+CKRG+G+
Sbjct: 6  PLQSVQVFGRKKTATAVAHCKRGNGL 31


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,101,632
Number of Sequences: 237096
Number of extensions: 131619
Number of successful extensions: 773
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 76,859,062
effective HSP length: 11
effective length of database: 74,251,006
effective search space used: 1336518108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)