Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D13
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88168-6|AAC24401.1|  127|Caenorhabditis elegans Hypothetical pr...    30   0.82 
Z74038-7|CAE17835.1|  132|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z83226-3|CAD21645.1|  218|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF324053-1|AAK01414.1|  218|Caenorhabditis elegans Ly-6-related ...    29   1.9  
Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical p...    28   3.3  
Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z74027-2|CAA98420.1|  210|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AF324058-1|AAK01419.1|  210|Caenorhabditis elegans Ly-6-related ...    28   3.3  
Z99281-19|CAD56260.1|  317|Caenorhabditis elegans Hypothetical p...    27   7.6  

>U88168-6|AAC24401.1|  127|Caenorhabditis elegans Hypothetical
           protein K11H12.7 protein.
          Length = 127

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
 Frame = +2

Query: 131 ATAVQCYYCNSANNSACIDLAKLDDETRSRVIPIVNCETAIPQPVAQDFFCRKIIQTIFH 310
           + A+ CY CNS N   C+     + E  +++ P+   ++       +   CR     +  
Sbjct: 14  SAALNCYICNSLNQPECVH----NYEKFNKICPV---KSFGGMKSVKPLGCR-----VSR 61

Query: 311 SYRDSEVRVTRGCGWVRHEKDCYKADNSDHL---ETVCQCFNDHCNSADXADPAAATVLF 481
            Y   E  + R C +    +D  +  N   L       QC  + CNSA+ +       +F
Sbjct: 62  QYVKEETSIVRECAYT--GEDIERKSNKGSLGVSRVYSQCSENLCNSAESSTHFLTAAVF 119

Query: 482 LIL 490
           + +
Sbjct: 120 IAI 122


>Z74038-7|CAE17835.1|  132|Caenorhabditis elegans Hypothetical
           protein F58B4.6 protein.
          Length = 132

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/52 (21%), Positives = 25/52 (48%)
 Frame = +2

Query: 338 TRGCGWVRHEKDCYKADNSDHLETVCQCFNDHCNSADXADPAAATVLFLILA 493
           T   G  +   +C+   +   +   C C+ D CNS+    P  +++L ++++
Sbjct: 76  TTQLGATQAPANCFNTTSGSSVMGTCCCYGDGCNSSPSMLPLGSSILAVMIS 127


>U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical
           protein K11H12.6 protein.
          Length = 132

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
 Frame = +2

Query: 140 VQCYYCNSANNSACIDLAKLDDETRSRVIPIVNC-ETAIPQPVAQDFFCRKIIQTIFHSY 316
           + CY CNS     CID    + +  + + P+ +     + +PV     CR     +   Y
Sbjct: 17  LNCYICNSKKQPDCID----NYQAFNTICPVRSLGGVKLHEPVG----CR-----VTRQY 63

Query: 317 RDSEVRVTRGCGWVRHEKDCYKADNSDHLE---TVC---QCFNDHCNSADXAD 457
              ++ + R CG++  E++  K + + +L      C   QC  + CNSA+ ++
Sbjct: 64  SKEKMWIIRECGYLGEERE-RKFNTTTYLNGEPATCVFSQCSENLCNSAESSN 115


>Z83226-3|CAD21645.1|  218|Caenorhabditis elegans Hypothetical
           protein F43D2.4 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 410 VCQCFNDHCNSADXADPAAATVLFLILAA 496
           VC C+ DHCN    A   +     L+L A
Sbjct: 187 VCTCYADHCNGNSAASSLSIVSALLVLIA 215


>AF324053-1|AAK01414.1|  218|Caenorhabditis elegans Ly-6-related
           protein HOT-1 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 410 VCQCFNDHCNSADXADPAAATVLFLILAA 496
           VC C+ DHCN    A   +     L+L A
Sbjct: 187 VCTCYADHCNGNSAASSLSIVSALLVLIA 215


>Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical
           protein R11A5.1b protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 367 LMTNPSATSRHTYFGIPIGVENRLYDLSAEEVLSDRLWYGGLTVH 233
           ++T      +H  F +P G + +   LS E++  +R   GGL  H
Sbjct: 784 ILTRDDGHEKHFRFEVPYGEQVQPIRLSPEDISKERSRLGGLNRH 828


>Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical
           protein R11A5.1a protein.
          Length = 906

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 367 LMTNPSATSRHTYFGIPIGVENRLYDLSAEEVLSDRLWYGGLTVH 233
           ++T      +H  F +P G + +   LS E++  +R   GGL  H
Sbjct: 794 ILTRDDGHEKHFRFEVPYGEQVQPIRLSPEDISKERSRLGGLNRH 838


>Z74027-2|CAA98420.1|  210|Caenorhabditis elegans Hypothetical
           protein C13G3.2 protein.
          Length = 210

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
 Frame = +2

Query: 239 CETAIPQPVAQDFFCRKIIQTIF-HSYRDSEVRVTRGCGWVRHEKDCYKADNSDHLETVC 415
           C T  P      F  R   + I  HS R  E     GC  +R         + D++  VC
Sbjct: 85  CVTLFPNLPDSTFVVRGCFENILRHSRRAEEQLQQDGCYLLRSLPMYSNTVSMDYV--VC 142

Query: 416 QCFNDHCNSAD 448
            C  D+CN+ +
Sbjct: 143 TCNGDYCNTME 153


>AF324058-1|AAK01419.1|  210|Caenorhabditis elegans Ly-6-related
           protein HOT-6 protein.
          Length = 210

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
 Frame = +2

Query: 239 CETAIPQPVAQDFFCRKIIQTIF-HSYRDSEVRVTRGCGWVRHEKDCYKADNSDHLETVC 415
           C T  P      F  R   + I  HS R  E     GC  +R         + D++  VC
Sbjct: 85  CVTLFPNLPDSTFVVRGCFENILRHSRRAEEQLQQDGCYLLRSLPMYSNTVSMDYV--VC 142

Query: 416 QCFNDHCNSAD 448
            C  D+CN+ +
Sbjct: 143 TCNGDYCNTME 153


>Z99281-19|CAD56260.1|  317|Caenorhabditis elegans Hypothetical
           protein Y57G11C.38 protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 374 CYKADNSDHLETVCQCFNDHCNS 442
           C  A  S  +++ C C +D CNS
Sbjct: 71  CSAASTSSSIKSTCSCNSDFCNS 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,866,887
Number of Sequences: 27780
Number of extensions: 192226
Number of successful extensions: 700
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)