Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D13
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   2.4  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   5.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 211 SFTGNTDCEL*DRHTTACRSGLLLQKDHTDDFPLLSGFR 327
           SFT +      ++  T   +GLLL++   DD P L   R
Sbjct: 453 SFTVDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIR 491


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 211 SFTGNTDCEL*DRHTTACRSGLLLQKDHTDDFPLLSGFR 327
           SFT +      ++  T   +GLLL++   DD P L   R
Sbjct: 453 SFTVDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIR 491


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 362 DEPIRNLASHVLRNPDRSGKSS 297
           D+ + +LA+H +    RSGK S
Sbjct: 354 DDLLNDLAAHKMHGRGRSGKKS 375


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 221 VIPIVNCETAIPQPVAQDF 277
           V+PI   ET+I Q    DF
Sbjct: 29  VVPICRIETSIDQQKEDDF 47


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 271 LSDRLWYGGLTVHNRYY 221
           +++ L+Y  LT H+ YY
Sbjct: 262 VTNNLYYSPLTSHSLYY 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,430
Number of Sequences: 438
Number of extensions: 2549
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)