Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D12
(503 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 53 3e-08
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 45 6e-06
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 33 0.032
SPBP8B7.31 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|... 27 2.1
SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 3.7
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 3.7
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 26 3.7
SPAC824.08 |gda1|gdp1|guanosine-diphosphatase Gda1|Schizosacchar... 25 6.5
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 6.5
SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.5
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 52.8 bits (121), Expect = 3e-08
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Frame = +3
Query: 36 CLTLNIYVPTTSNSNQPTPVIVWFYGGGYIMGSAGDY---GGKYLVKHN----IIVVTVN 194
CL LNI+VP + PV+ + +GG +G+ Y + L I+V+
Sbjct: 82 CLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAKFILVSPG 141
Query: 195 YRLGPYGFFC----LDDASVPGNQGLKDQITALQWIKENIGAFGGNASKVTIAGESYGGG 362
+RL +GF L++ N G DQ L+W ++I +FGGN + + G S G
Sbjct: 142 HRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGGISAGSY 201
Query: 363 SVDLHLYSLYEKLFDKA--IVQSGSMFTEGMFVK 458
S L +YE +A I++ + + G+ V+
Sbjct: 202 SALFQL--IYETYHPEANQIIKRALLLSNGLSVQ 233
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 45.2 bits (102), Expect = 6e-06
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +3
Query: 90 PVIVWFYGGGYIMG---SAGDYGGKYLVKHNIIVVTVNYRLGPYGFF--CLDDASVPGNQ 254
P +WF+GGG+++G + + + +VV V+YRL P F C+DD
Sbjct: 101 PCFLWFHGGGWVLGNINTENSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDG------ 154
Query: 255 GLKDQITALQWIKENIGAFGGNASKVTIAGESYGG 359
AL + EN G N +K+ + G S GG
Sbjct: 155 -----WEALLYCYENADTLGINPNKIAVGGSSAGG 184
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 32.7 bits (71), Expect = 0.032
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +3
Query: 93 VIVWFYGGGYIMGSAGDYGGKYLV---KHNIIVVTVNYRLGPYGFFCLDDASVPGNQGLK 263
++V+++ G+ M D + + K + V+V+YRL P F V N
Sbjct: 92 LMVFYHSSGWCMRGVRDDDSLFKILTPKFGCVCVSVDYRLAPESKF-----PVAHN---- 142
Query: 264 DQITALQWIKENIGAFGGNASKVTIAGESYGGGS 365
D I + +W+ NI G N + G + GG+
Sbjct: 143 DAIDSFKWVASNIEKLGANPKRGFFLGGASAGGN 176
>SPBP8B7.31 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 177
Score = 26.6 bits (56), Expect = 2.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 502 WPSSFDNFMAAPWSPLTNIPSVNID 428
WP D + AP+ P N P V ID
Sbjct: 20 WPLWIDTHVTAPFKPSKNDPGVLID 44
>SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 3.7
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 156 YLVKHNIIVVTVNYRLGPYGFFCLDDASVPGNQGLKDQITALQWI 290
+L NI+ T+ + GP+ L A++ + +Q T W+
Sbjct: 221 FLATMNILAQTLGFMAGPFLGGILAKATIHSKNAVWNQYTVASWV 265
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 3.7
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 466 WSPLTNIPSVNIDPLCTIALSNNFSYKEY-RCKSTLPPP*LSPAI---VTFDALPPNAPM 299
+ PL +I SV + LC AL N SY+ + + PP P + +T + LPP
Sbjct: 475 YRPLIDITSVGLPLLCDEALWNADSYEAWTSLLNENDPPHFFPVLKMFLTNEHLPPKLSP 534
Query: 298 FSLI 287
++++
Sbjct: 535 WNMM 538
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 25.8 bits (54), Expect = 3.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 453 RTYLQ*TSTHFALSLCQITFHTKNI 379
R YL+ T++ + L LC I F+ ++I
Sbjct: 871 RAYLRLTASKYFLKLCSIPFYAEHI 895
>SPAC824.08 |gda1|gdp1|guanosine-diphosphatase
Gda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 556
Score = 25.0 bits (52), Expect = 6.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 285 WIKEN--IGAFGGNASKVTIAGESYGGGSVDL 374
WI N +G GG A+ T+A GG S L
Sbjct: 261 WITINYLLGTLGGKATHSTVAVMDLGGASTQL 292
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 433 IDPLCTIALSNNFSYKEYRCKSTLPPP*LSPAIVTFD 323
I L T+A NN ++ +C + PP L P ++ +
Sbjct: 573 IPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSME 609
>SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 227
Score = 24.6 bits (51), Expect = 8.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 54 YVPTTSNSNQPTPVIVWFYGGGYIMGSAGDYGGK 155
Y+ SN+N P VIVW G + + G G K
Sbjct: 176 YLWELSNTNDPPHVIVWHTAKGTNVMTMGPLGLK 209
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,249,546
Number of Sequences: 5004
Number of extensions: 48788
Number of successful extensions: 115
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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