Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D11
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038611-9|AAB92041.2| 180|Caenorhabditis elegans Ribosomal pro... 206 9e-54
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z69787-6|CAA93637.1| 341|Caenorhabditis elegans Hypothetical pr... 28 3.3
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical... 27 7.7
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 27 7.7
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 7.7
>AF038611-9|AAB92041.2| 180|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 20 protein.
Length = 180
Score = 206 bits (502), Expect = 9e-54
Identities = 90/153 (58%), Positives = 121/153 (79%), Gaps = 1/153 (0%)
Frame = +3
Query: 3 KAKGE-LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 179
KA GE L EY V+GRK+P+E EP P++KM+IF+ + ++AKSRFWYF+ L++ KK GE
Sbjct: 4 KALGETLNEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGE 63
Query: 180 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 359
I+SIK++ EK+P +KN+G+WL+Y+SR+G HNMYREYRD +V GAVTQCYRDMGARHRA+
Sbjct: 64 ILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQ 123
Query: 360 AHPIQIIKVEVIKAAACRRPQVKQFHTSKDRFP 458
A I I+KV+ +KA +R +K FH +K RFP
Sbjct: 124 ADRIHILKVQTVKAEDTKRAGIKMFHDAKIRFP 156
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 28.7 bits (61), Expect = 2.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 363 HPIQIIKVEVIKAAACRRPQVKQFHTSKDR 452
+P + + + +K A C+ P FHT +D+
Sbjct: 921 NPFRRVGLSALKDATCKNPTTSDFHTKEDQ 950
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 28.7 bits (61), Expect = 2.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 363 HPIQIIKVEVIKAAACRRPQVKQFHTSKDR 452
+P + + + +K A C+ P FHT +D+
Sbjct: 921 NPFRRVGLSALKDATCKNPTTSDFHTKEDQ 950
>Z78417-5|CAB01686.1| 1224|Caenorhabditis elegans Hypothetical protein
C35C5.6 protein.
Length = 1224
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 211 LFSGISLM-DTISPVVFLNFFNCLKKYQKRDFATIGSGEKILI 86
L S +SL+ + P + L+FF K+Y D T+G G+ + +
Sbjct: 1080 LLSSVSLLKQLVLPAISLDFFVNGKQYVSEDDVTVGIGQFVTV 1122
>Z69787-6|CAA93637.1| 341|Caenorhabditis elegans Hypothetical
protein C44C10.7 protein.
Length = 341
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 174 GEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGG 311
G I+ + +PVKI +FGI R+ +R G H + RD+ G
Sbjct: 184 GNILFASRLTPTAPVKIVDFGIGRRFANRRG-HPIPSPSRDIDFLG 228
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -2
Query: 284 TVHIVDTRARLVTQPDTKVLNLNRTLFWNFLDGYNFT 174
+++++DTR + + T + N+ + WN ++ YNFT
Sbjct: 217 SIYVLDTRQDVPLKKVTMKMRPNK-ISWNPMEAYNFT 252
>AL132860-14|CAB60497.1| 619|Caenorhabditis elegans Hypothetical
protein Y56A3A.16 protein.
Length = 619
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 12 GELKEYEVIGRKLPSESEPK-PPLYKMRIFSPDPIVAKSRFWY 137
G +E ++ PS S P PP Y+ + IV S FW+
Sbjct: 73 GTSEENSLLSPDSPSSSTPNFPPQYESQNLKESVIVRNSIFWF 115
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 475 ERVMVAGNRSLLVWNCLTCGRRHAAALITSTLMICIGCARALCL 344
ERV A + +++ N ++ R H +I + C+G R L +
Sbjct: 814 ERVKRASDAAVVALNIMSSHRMHKQVIIEDVIDRCVGLTRLLLI 857
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 144 RQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYR 293
R+L KF+ +G+ V + + E S FG + + G HN ++ R
Sbjct: 8 RKLVKFETESGKKVELDAVYEDSLTSGSPFGTVVAFHGSPGSHNDFKYIR 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,353,644
Number of Sequences: 27780
Number of extensions: 230590
Number of successful extensions: 706
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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